Euwallacea fornicatus (polyphagous shot-hole borer): 136346830
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Entry
136346830 CDS
T10685
Symbol
HBS1
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136346830 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136346830 (HBS1)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136346830 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
HBS1_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
136346830
NCBI-ProteinID:
XP_066152396
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Position
24:1232047..1242976
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AA seq
668 aa
AA seq
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MARHRDIRNMDYEDEYDGYDDVYGHSIDDDYYISPSNRQFIYNRETSRESKFEHKDDIQE
ADEIDELSDVEKAKLNSCIDQITSILESISIPRSELVALILQHKFKTDLVINAILKDSKY
AGPSGATKEKAIPSFVPPTVVEPLSTPTAKVVASTATNVVKGFNLPQREAETNPIPSKGF
DFANRLNGTPRSQSPASGRGQSPASGRGTPVGDGEEPRVGRREPKIDPESQYRKERGSGK
EHLYMVVIGHVDAGKSTLMGRLLCELGQVNKKTMHKYEQDSKKVGKQSFMYAWVLDETGE
ERDRGITMDVGRYLFETKTKEVTLLDAPGHKDFIPNMISGAAQADVGLLVVDATRGEFET
GFDLGGQTREHALLVRSLGVNQLAVAINKLDTVCWSKERFDEIVQKLKQFLKQAGFKDSD
VTFVPCSGLTGQNLVKPPTENELLEWYTGSYLLAVIDKFRSPPRPVTKPFRFSVNDVFKG
TGSGFCVDGRVETGIVNIGDKILICPNKEQVVVKLISIDESPKTVAFAGDQATITLSGID
IQNVSIGNILCDPHNSVPVSTKFEARIVIFNIAIPITKGYSIILHHQSLSEPAVISKLTS
QLNKSTGEVQKKHPRFLGKNSSAIVEITVSKPIALELYSECKELGRVMLRVGGVTIAAGL
ITRIISAN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcatcgcgatatacgaaatatggattacgaagacgaatacgatggatatgac
gatgtttacggacattctatagacgacgactattacatttcccccagtaacagacaattt
atttacaatcgagaaacatctcgagaatcaaaatttgaacataaggatgacattcaagaa
gctgatgaaatagacgagttgtcagatgtggaaaaagccaagctcaattcttgcatagat
cagattactagtatactggaaagtatcagtattccaagaagtgaactggtagcattgata
ttgcagcacaagttcaagactgatttggttattaatgcaatactcaaggattccaaatat
gctggtcccagtggggctacaaaagaaaaagctataccgtcctttgttcccccaactgtg
gtcgaaccgttgtcaacaccgactgctaaagttgtagcctcgacggccaccaatgtggtg
aaaggttttaatttacctcagcgagaagctgaaacaaaccctatcccatcaaaagggttc
gattttgccaacaggttgaatggtactccgaggtcgcaaagcccagcttctggcagggga
caaagtcctgcgtctggaagaggtacacctgttggggatggagaagaaccaagagtggga
agaagagaaccgaaaatagatccagaatctcaatatagaaaggaaaggggtagcggcaaa
gagcatttatatatggttgtgattggtcatgtcgatgccggaaaaagcacactgatggga
aggttgctgtgtgagttagggcaggtgaacaaaaagacaatgcacaaatatgaacaagac
agtaagaaagtaggaaaacagagctttatgtatgcttgggtacttgacgagactggcgaa
gaaagggatagagggataaccatggatgtaggaagatatttgttcgaaacaaaaactaaa
gaggtgactcttttggatgctcctggtcataaagattttattccgaatatgatttctggt
gctgcacaagccgatgtgggtttactggttgtggacgccacgagaggtgaatttgaaact
ggttttgatttgggaggtcaaaccagagagcatgcgttgcttgtccgatctctgggcgtt
aatcaattggctgtggcaattaataagctagatactgtgtgttggtcaaaggaaagattt
gacgaaatagttcaaaaactgaagcaatttttaaaacaagcgggttttaaagattcagac
gtaactttcgtcccatgtagtggactaaccggacaaaatcttgtaaaacctccaacagag
aatgagttgctagagtggtatacaggatcatatcttttagctgttattgacaaattccgg
tcccctccacgtccggtgactaaaccatttagattttcagttaatgatgttttcaaggga
acgggctcaggattttgtgtagatggaagagtcgaaacgggaatcgttaacatcggtgat
aaaatattaatatgtcccaataaggaacaagttgttgtcaagttgatatctatcgatgaa
agtccaaaaactgtagcttttgccggtgatcaagctacaataacattgtcaggaatagat
attcagaatgtttccataggtaatatattgtgtgatcctcacaattcagttccagtttcc
acaaaatttgaagccaggattgtgattttcaatattgcaataccaataaccaaaggatat
tctattattttacaccatcagtctctctctgagccagctgtgataagcaagctcacttct
cagttaaataaaagtacaggagaggttcaaaagaagcatccacgctttttgggaaagaat
tccagtgccattgttgagattacagtttcaaagcctatagctttggagctgtatagtgaa
tgtaaagagctgggaagggttatgttgagagtgggaggggtgactattgcagctggactg
atcactaggataatatctgctaattaa
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