Euwallacea fornicatus (polyphagous shot-hole borer): 136347252
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Entry
136347252 CDS
T10685
Symbol
sw
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor04145
Phagosome
efor04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136347252 (sw)
09142 Cell motility
04814 Motor proteins
136347252 (sw)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efor03036
]
136347252 (sw)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efor04812
]
136347252 (sw)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
136347252 (sw)
Cytoskeleton proteins [BR:
efor04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
136347252 (sw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Dynein_IC2
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
136347252
NCBI-ProteinID:
XP_066153171
LinkDB
All DBs
Position
27:complement(1890559..1901874)
Genome browser
AA seq
683 aa
AA seq
DB search
MADRRAELERKKAKLQAIRDEKERRRREKESKDVKETLDRAHLGVGGDRRDIDEMLSEVG
VAPLSEIYSSISTLNSLTPEQSRNHTPDASLQMNSLPNNVIAAKKKTPHLTVVPVQTTSI
PPKEVVLYTKQTQTTATGHELRDGFSSASSSPLKGYMEDWWRPRKAHATDYYDEYNLNPG
LEWEDEFTVLTYGDPQGEDEESSLPHLGASKLPPGILPHGLPQVKEVQPAVTQLEQEAKK
EEVKEIRELSEEEKQMIILSEEFQRFVDRAGQIMERALCETVDIYTDYSGIGEEALDEKC
HQRISFNRTFFDERWSKNRTITSLDWSPQFPELLLASYNNNEESPNDPDGVVLVWNTKFK
KTTPEYIFHCQSAVLSATFARFHPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSASAHT
HPVYCLSVVGTQNAHNLISISTDGRMCSWSLDMLGQPQEILDLHRMQGKPVAVTCLDFPS
SDVNNFVVGSEEGAAYSACRHGTKAGITETYDGHQGPITGVSVNAVQGGIDFSHMFLTSS
LDWTIKLWSLKDSKPIYSFDDNGDYVLDVKWSPVHPALFAAVDCSGRLDLWNLNQDTEVP
AASVTVEGMPALNKVSWTPSGLHVTVGDNLGRIHVYDVAENFAHPRHDEWNKFLYTTQEL
WNNQVDEELEKLNFSVSNINTSF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgaagagctgagttagagcgtaaaaaagctaagcttcaggctattcgagat
gaaaaagaaagaagaaggagagaaaaggaatccaaagatgttaaggagacattggatcgt
gcccatctgggggttggcggtgatagaagagacattgatgagatgcttagcgaagttgga
gtagctccactatcagaaatttactccagcatttcaactttaaattcactgacccctgag
caaagcagaaaccatacacccgatgcatccttgcaaatgaatagtttaccaaataatgtt
attgctgcaaagaagaaaaccccacatcttaccgtggttccagttcaaacaacaagcatt
cctcctaaagaagttgtcctttataccaaacaaacccaaactactgcaactggccatgaa
ctacgtgatggattttcttctgcatcgtcatcaccccttaaaggctatatggaggattgg
tggagaccacgtaaagctcatgccacagactactacgacgaatacaacctaaacccaggt
ttagagtgggaagatgagttcacagttctgacgtatggcgacccacaaggagaggacgag
gaaagttcgctgccacacctcggggccagcaaactgcccccaggcatcctcccccatggg
ctaccccaggtcaaagaggttcagccggcagtcacccagttggagcaagaagcgaaaaaa
gaggaagttaaagaaattagggaactcagtgaagaagagaaacaaatgattattctctcc
gaggagttccagcgtttcgtggaccgagccggtcaaataatggagagggcattgtgcgag
actgtggacatttataccgactattcgggcattggagaagaggctttagacgagaagtgc
catcaaaggatttctttcaatagaacgtttttcgatgagagatggtccaaaaaccgaacg
ataacatctttagactggtcgccgcagtttccagagctacttttggcgtcatataataat
aacgaagaatcaccaaacgatccggacggtgtagttctagtttggaacaccaaatttaag
aaaactactcctgagtatattttccattgtcaaagtgccgtgctatcagctacatttgca
aggtttcatccgaatcttattttgggcggtacctattctggacaaattgtattgtgggac
aatagagtgcaaaagaggacgcccatacaaagaactccattatcggctagtgcgcatacg
catccagtgtactgtctgtcggtggtggggacccaaaacgcgcacaatctgatcagcatc
tccactgatggtaggatgtgttcgtggtctttggatatgttgggccaacctcaagaaatt
ctcgacttacaccggatgcagggcaaacccgtggctgtgacctgtctggactttcctagt
tcggacgtcaataatttcgtggtgggatctgaggaaggggcggcatattcagcttgccgg
cacggaacaaaggcaggcataacagaaacctacgatggtcatcaagggcccattactggg
gttagtgtaaacgcggtccaagggggaatcgatttttctcacatgtttcttacctcctcg
ttggattggactattaagttatggagcttaaaggactccaaaccaatctattccttcgat
gataacggcgattacgtgctggacgtgaaatggtcgccggtgcatcctgcccttttcgcc
gctgttgattgcagcggtcgtttagatctatggaacttgaatcaggacaccgaagtaccg
gcggccagcgttacagtggaaggaatgccggctttaaacaaggtgtcctggacgccatct
ggattgcacgtcaccgttggggataacttgggtcgaattcatgtgtacgatgttgcagag
aactttgcccatccaaggcacgatgaatggaacaaatttctctacacgacgcaggaattg
tggaacaaccaagtggacgaggagttggagaaattgaatttttcggtgtccaacataaac
acctcgttttaa
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