Euwallacea fornicatus (polyphagous shot-hole borer): 136347978
Help
Entry
136347978 CDS
T10685
Symbol
Bap170
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03082
ATP-dependent chromatin remodeling
Brite
Transcription factors [BR:
efor03000
]
Eukaryotic type
Helix-turn-helix
ARID
136347978 (Bap170)
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136347978 (Bap170)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
136347978 (Bap170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
BAF250_C
Motif
Other DBs
NCBI-GeneID:
136347978
NCBI-ProteinID:
XP_066154555
LinkDB
All DBs
Position
30:complement(1756600..1772391)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAEIVGKDEATYSKERDSFLRDLRHFHEVRGTPFKRCPTLGGKEIDLYLLYSLITAEGGW
IKVNSKNLWNNFWPHFKIPSSCVNASVALKQIYLRYLDRWEKVHFLGEDGDRGSDDDEES
RHKRWSARVLHAVPHTYVYAQHNVSDEKREQHHLDSNIYRPSDYDRLALSLISPLPNEQD
FAINVCTLLSNDNRNNLKLEKHPRIVTYLLGHAGIFNYSSLRQLFMYVYSEVRKKPIHNF
WSDVLESDEFLDLTNETKFCPLVEEDKPCDTLLKDDFLKYAGLDLPPSEQSAKNVCDMDS
ECEIFEDSLKLPKYVKFKSDSCDRELFCLRRTLGTQDYIGQRVLQIATILRNLCFIEDNV
AVLTKNSAFIRFLLLCCCSQWNALKTLGLDMLGNIATDIELKDVQTDLIASFLLKIVSKN
LQSDDRAACLSSVEVLNKLSQNEKNEDVLIRSLESTVYNKVCSFLTIHDVMLLIYTLECL
YSLSSLGERACNFIANNHGVIDTLVSLVTVEGKSYGPKACIGMKLVETIPSGSQLQSQTQ
ATLQQQQSSPQTSPQPTAVTSSSTHVSNSVTNVLSAAIVSPPPAPCVTPVKIISNISTTP
IRNVTIAPQRILATPVAVTTKTDGVVSAAAKTITLTAPTITTTTPAVAAPPAVQPLTPQQ
LIQQQHAHQQAIHENEQFALAWLRATYEPSTAGNKVDHQELYKHYLNSCSQIGRRGVISP
LHFPRCVRSVFGGTVGPNPMKPANPGDPQFYEGIKVRAQPLKLNIPPSSSPPKPCFNPVS
RTGALAVQPKSAVRRKQKVAPVLAAKSDAAPLSVEAEPEGALTILSPSSPILKAQLSAPP
KPRESATSTLVAPSDSKSQAMAHPHLSHALLGSGSSSSTTSVTPLAAAPLKLETQDYQLV
QTGQSNSSSLIKSLLATKVNDACLPAVSMKIATADCQNVAQVAARQRLLSQQNVAPAEPI
PQPKNQSRLDALKMHRINGVRQLFNDSDVGDPSVSSTTQFASTIKGKKEPPQPPPPPLAP
LSNHKAKTPPIVNEDSDSLSSTSGIAAVGIVSSTEDNDNSLTSFEGLLNGMPIVEETLNE
SSDSKDSVKNPGSEISIDKPLRLADLLEKKFDKSPTLLNGSLSKDLKLSSDRSDLLENHI
EKALSRDKVRNEVEEVNMEVEEMKVEGVVEMKQGMKRRASEDISEVDAKKAHVLTNVNGS
SDPAESSNGEDRPSTVSTAAAKLFADFAADILEDEDEEQLMQVAQTPNPPVVESGPQLIV
DNNQQVLLSQPRQIIVSQPQIHTTNQQVVFSSGTSIKTASGQTVIVNAGMQQRQSVLIQP
NAGQLLLSQGLQGQVQLVQSSQSGQYVIQTNSSQGYVVAQPQTAVVHGQPQTVLLAQQGQ
SVGSKTIIILQQQPTGSATHHQKVVVTPQGQQVVVTQVPRPVAQSSSVSNNIQQSKSARP
TPAPSPALSTTSTSSSLSNGVKEEPKIKIVRDLTTPYVCEWGDCVIDTKFKSANQVYMHA
CEAHCPQGDEEVICQWDRCDSLKRKRFSLMTHLHDKHCNVEAMKHSLVRRKKISQGINVE
PPPASPTSHPGYAPDAALHAIKRHALEFVNPKELQIKTPKHGGTTTIKVQLPPQDQDDNE
GPVTKSIRLTASLILRNLVIYSSHCKRYLKSYESHLANIALSNVESSRTIAQVLYDINDG
TTHR
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaattgtcgggaaagacgaggccacgtactccaaggaaagagacagttttctt
cgcgatttgcgacacttccatgaggtcagggggactcccttcaaacggtgccctaccctt
ggaggtaaggagattgacctctatctgctgtattcactgatcacagctgaagggggctgg
attaaggtgaactcgaagaacctatggaacaatttttggcctcatttcaagatcccatcc
tcctgcgttaacgcatctgtcgccctcaagcaaatttacttaaggtatctggaccgttgg
gaaaaagttcactttctgggtgaagatggagatagaggaagcgatgacgacgaagagagc
agacataaacgttggtctgcgcgggtgctacacgctgttcctcatacctatgtttacgcc
caacataatgtatcagacgagaaacgcgagcagcatcacttggattcaaatatttaccga
ccttcggactacgatagattggccctctcgttaatatcacctctacctaatgaacaggat
ttcgcgattaacgtctgcacgttactctccaacgacaataggaacaatctaaagctagag
aaacatccaaggatcgtcacttatctgctaggtcatgcgggaatttttaattacagctct
ctgcggcaactgtttatgtatgtgtatagcgaagtaagaaaaaagccgattcataacttc
tggagtgatgtgctcgaatcggacgaatttttggatctcacaaacgaaactaagttctgc
cctctggtggaagaggacaaaccctgtgatacgttgttaaaggatgattttttaaaatac
gccggcctagatttaccgccaagcgaacaatcagcgaagaatgtgtgtgatatggacagt
gaatgtgaaatttttgaggatagcttaaagctacccaagtatgtcaagttcaaatcggat
tcgtgcgatcgggagctgttttgtttgcgacgaactttgggtactcaggactacatcggg
cagcgggtactgcagatcgcgaccatcttgcggaatctttgtttcatcgaagacaacgtg
gccgtgttgacaaaaaattctgcctttattaggtttttgttattgtgctgctgttcgcag
tggaacgcgctgaagacgttagggctcgatatgttgggaaacatcgccacagatatcgag
ctgaaggacgttcaaaccgacttaatcgcgtcgtttttactgaagattgtcagcaagaac
ttgcaaagcgacgatcgcgccgcttgtctgtcatccgtagaagtattaaataaactaagc
caaaacgagaaaaacgaagacgttcttattcggtcattagagtcaactgtatataacaaa
gtctgttcctttctcaccattcacgatgtcatgttattaatttacactttagaatgtttg
tactctttgtcgtcccttggagaaagggcttgtaactttatagcgaataaccatggggtg
atagatactctagtgtcactggtaactgtggagggaaaaagttacggacccaaggcgtgt
attgggatgaaactggtggagactattccctcgggaagtcaactgcaatctcagacgcag
gcgacattgcaacagcaacaaagttctcctcaaacctctccacaaccgaccgctgtaact
tcgtcctcgacgcacgtatcaaattcagtgacaaacgttctttcggcggcgattgtcagt
ccacccccagcgccatgtgttacgcctgtcaaaattatatccaacatttccaccactcca
attaggaatgtaaccatcgctccacagagaatattagctacaccagtggctgttactacc
aaaacagatggggtggtgtctgcagcagccaaaaccataaccctgaccgctcctaccatc
accaccaccacaccagctgttgctgcccctcctgctgtccaacctttgaccccacagcag
ttgattcagcaacaacatgcccatcagcaagccatccatgaaaatgaacagtttgctttg
gcatggctgcgagccacctacgaaccttccactgccgggaacaaggtggatcatcaggag
ttatataagcactatttaaattcctgttcgcaaattggaaggcgtggagtcatttcaccg
ctgcactttcccagatgtgtacgatcagtattcggcggaactgtgggcccgaacccaatg
aaaccggccaatcccggagatccccagttctacgagggaatcaaggtgcgcgcccaaccc
cttaaactcaacattcccccctcatcttctccccccaagccctgtttcaaccccgtttcg
agaaccggtgctttagcggtgcagcctaagtcggcggtgcgccgaaaacagaaagtggcg
ccggttctcgccgccaaaagcgacgcggcgccactatctgtggaggcggagccagaagga
gctttgaccattttgtccccttcatcccccatcctcaaagctcagttgagcgctccacca
aagccacgggagagcgctacctccacgctggtcgctccgagtgattctaagagtcaggcc
atggctcatccccacttgagccacgcgcttcttggtagcggcagctcgtcgtcgacgacg
agcgtgactccgttggcggccgcgccgctcaagctggaaactcaggattaccaattagtg
caaaccggacagagtaatagcagttcgttaattaaaagcctactggcaacaaaggtaaac
gatgcatgcttgccggcagtgagcatgaagattgccaccgcagactgccaaaatgtagcc
caggtggctgctcgccaaagactcctttcgcaacagaacgtcgctcccgcggaacccatc
ccccaaccgaaaaaccaaagtagattggatgcgttaaaaatgcacagaatcaatggggtg
cgacagttgtttaatgacagtgacgtcggtgacccttcagtgtcttcaaccactcaattc
gcgagtaccattaagggtaaaaaagagcccccgcaaccaccacctccaccgctggcgcct
ttaagcaaccacaaagcgaaaaccccgcccatagtgaacgaggacagtgactccctctcg
tctacctctggcattgccgcagtgggcatcgtctcctcaactgaggacaacgacaattcg
ttgaccagtttcgagggtttgttaaacggtatgccgatagtcgaagagacactgaacgag
agcagcgattccaaagattctgtaaaaaatcctggtagtgagataagtattgacaagcca
cttaggctggcagatttgctggagaaaaagttcgataagagtccgacattattgaacggc
agtttaagtaaagatctgaaattgagctccgacaggtcggatttgttggagaatcacatc
gagaaggctttaagtagggataaagttaggaacgaggtcgaggaagttaatatggaagtc
gaagagatgaaagtagagggtgttgttgaaatgaaacaggggatgaaacgccgagcttcg
gaggatatttcggaggtcgacgccaagaaagctcatgtgctgaccaatgtaaatggcagt
agcgatcctgcggagtcatctaacggagaggaccgaccatccactgtgtccactgcagca
gccaagttgtttgccgattttgctgcggatattttggaggatgaggacgaggagcagctg
atgcaggtggcgcaaactccgaatcctccggtcgtcgagtcaggaccgcagctgatagtg
gacaataaccagcaggtgctgttgtcgcaaccgagacaaatcatcgtctcgcaacctcag
atacacaccactaaccagcaggtggtattttcttcaggaacatcgataaaaaccgcttct
ggtcagacagtaattgtaaacgcaggaatgcagcagagacaatccgttctaatacaacca
aacgcggggcaactgctattgtcgcagggccttcagggtcaggtccagctggtacagagc
tcccaaagcggacaatacgttattcagaccaattcctcgcaaggttatgttgtggcgcag
cctcaaactgcagtggtccacggccagccccaaaccgttctcttggcgcagcagggccaa
agcgttggctcgaagacgataattatcctacagcagcagccgacgggttctgccacccac
catcaaaaagtcgttgttacgccacaggggcaacaagtggtggtaactcaagttcctagg
cctgtggcccaatcttcttctgtatcaaacaacatccagcaatcaaagtccgcaagaccg
actcctgcaccctctccagctttgagtacaacgtccacctcctcctcgttgagtaatgga
gttaaggaagaaccgaaaatcaagatcgttcgggaccttaccacgccgtacgtctgcgag
tggggcgattgtgtcatcgacacgaaattcaaatccgctaatcaagtgtacatgcatgca
tgcgaagctcactgtcctcaaggtgacgaggaggtcatctgtcagtgggatcgctgtgat
tccttgaagcgcaaacggttttccttgatgacacatttgcacgacaaacactgtaatgtt
gaggctatgaagcatagtttagtaagacggaaaaaaatctcgcagggcataaacgtggag
ccgcctccagcgtctccaacctcgcatcccgggtatgcgccggatgcagcccttcatgcc
attaaaaggcacgcattggagtttgttaaccccaaggaattgcagatcaaaacccctaag
catggtggtactacaacaataaaagttcagcttccacctcaagatcaggacgacaatgaa
gggccagtgaccaaaagcatacggttaacagcttcattaatcctgcgcaatctggtgatt
tacagcagccattgtaaacggtacttaaaatcgtacgagtctcacttggcaaacatcgca
ttgagtaacgtagaatcttcgagaaccatagcacaagtattgtacgacataaacgatgga
acgacccacaggtga
DBGET
integrated database retrieval system
