Euwallacea fornicatus (polyphagous shot-hole borer): 136348254
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Entry
136348254 CDS
T10685
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018
RNA degradation
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136348254
09123 Folding, sorting and degradation
03018 RNA degradation
136348254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136348254
03041 Spliceosome [BR:
efor03041
]
136348254
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136348254
mRNA degradation factors
5'-3' decay
Lsm complex
136348254
Spliceosome [BR:
efor03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136348254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
136348254
NCBI-ProteinID:
XP_066155049
LinkDB
All DBs
Position
32:complement(1444059..1445276)
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AA seq
89 aa
AA seq
DB search
MSTMPVSSSTLLPLELVDKCIGSRIHIVMKNDKEIIGTLLGFDDFVNMLLEDVTEYETTP
EGRRITKLDQILLNGNNITMLVPGGDMPE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagtactatgccagtaagttcttctactctactacctttagagctggtagacaaatgt
ataggttcaaggattcacattgtgatgaaaaatgataaagaaataattggcactttattg
gggtttgatgactttgttaatatgttattggaggatgtgactgaatacgagacaacacct
gagggcaggagaattacaaaattggatcagatactactcaatggtaataatataaccatg
ctggtcccagggggagacatgcctgaataa
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