Euwallacea fornicatus (polyphagous shot-hole borer): 136348297
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Entry
136348297 CDS
T10685
Symbol
Xpd
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03022
Basal transcription factors
efor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136348297 (Xpd)
09124 Replication and repair
03420 Nucleotide excision repair
136348297 (Xpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efor03021
]
136348297 (Xpd)
03036 Chromosome and associated proteins [BR:
efor03036
]
136348297 (Xpd)
03400 DNA repair and recombination proteins [BR:
efor03400
]
136348297 (Xpd)
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
136348297 (Xpd)
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136348297 (Xpd)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136348297 (Xpd)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136348297 (Xpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
136348297
NCBI-ProteinID:
XP_066155132
LinkDB
All DBs
Position
32:complement(1898177..1901596)
Genome browser
AA seq
762 aa
AA seq
DB search
MRLSVDGLIVYFPYEYIYPEQYAYMCELKKALDAKGHCLLEMPSGTGKTTTLLSLVVAYM
VEHPHDVRKLIYCSRTVPEIEKVMEELDKLLKYYEKQEGQYPSLVGLVLSSRKNMCIHPQ
VSTEREGKIVDGKCHSLTASYVRERHNIDDTTPVCQYYEGFALDGKESNLPYGVYGLDEI
KQYGRDRNWCPYFLSRFAIMHANIVVYSYHYLLDPKIADVVSKELARESVIIFDEAHNID
NVCIDSMSVKIHRRTIERATANIGTLEKHVSEMRDEDHRRLQEEYQRLVDGLRDASVARD
TDLILANPVLPDEILQEVVPGNIRNAEHFISFLKRFVEYLKTRLRVQHVVQESPVGFLKD
VQQKVCIERKPLRFCAERLASLLRTLEITDMTEFSPITLITHLATLVSTYTKGFTIIVEP
FDDKTPTVSNPILHFSCLDSSIAIKPVFDRFQTVVITSGTLSPLDMYPKILNFYPVVMAS
FTMTLARPCLLPMIVSKGNDQVAISSKFETREDNAVIRNYGQLLVEVAANVPDGVVCFFT
SYLYMESVVAAWYDQGVIDSLQRYKLLFIETQDSAETSLALMYYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMIFADKRFARIDKRSKLPKWIQEHLKDSLCNLSTEEAVQIAKRW
LRQMAQPFTREDQLGVSLLTLEQLQTMEQKKLEEQTHEEMEI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgagcgtggatggtttgattgtgtacttcccttacgagtatatctaccctgaa
caatatgcttatatgtgtgaactcaagaaggcacttgatgctaagggtcattgtctgctg
gaaatgccttcaggcacaggcaaaacaaccacccttctttctctagttgtagcttacatg
gtggagcatcctcacgatgttcgcaagctaatttactgttcccgcacagtgcctgaaata
gagaaagtgatggaagagcttgataagttgctgaagtattatgaaaagcaagaaggccaa
tatccaagccttgtaggtttggtgttgagctcccgtaaaaatatgtgtatacaccctcag
gtgagtactgaacgggagggtaaaatagttgatgggaagtgccacagcttaactgcatct
tatgtgagggagcgtcataatattgatgacacaactccagtgtgccagtactatgaaggc
tttgcccttgatggtaaagagagcaatttgccctatggagtctatgggctggatgaaatt
aaacagtatggcagagaccggaactggtgtccatattttttatccagatttgcaataatg
catgccaacatagtagtatacagttaccactacctgttggatccaaaaatagctgatgtg
gtctcaaaagaactagcccgtgaatctgtcattatctttgatgaggctcataacattgac
aatgtttgtattgattctatgagtgttaaaattcatcgacgcaccatagagcgagccaca
gcaaatattggaacacttgagaaacacgtctctgaaatgcgggatgaagatcatcggcgg
ctgcaagaggagtatcagaggcttgtcgatggtcttcgagatgccagtgttgctagagac
actgatttaatactagccaatccagtgctgcctgatgaaatactgcaagaagtggttcca
ggaaatataaggaatgctgagcatttcataagttttttgaagcgatttgtggaatatttg
aaaaccagattgagggtacaacacgtagtacaagaatcaccagtgggcttcctcaaagac
gtgcaacaaaaagtatgcattgaacgcaaacctctacgattctgcgcagaacgtttggcc
tcattgctgcgtacccttgaaatcactgatatgacagaattcagccccattacactcatc
actcacttggccaccttagtgtcgacatacacgaagggattcactattattgtagaaccc
tttgacgataaaacacccactgtttctaatcctatattacattttagttgtctagattcg
tccatagcaattaaaccagttttcgatcgttttcagacagtagttataacttcgggaact
ttgtcccctttagacatgtatccgaaaatcttgaatttttatccagtggtgatggcctct
tttactatgactttggccaggccgtgtcttttgcctatgatagtgtcgaaaggcaacgat
caagtggcaatttcctcgaaatttgagacaagggaggacaacgcagtgataaggaattat
gggcagctcctagtggaggtggctgcaaatgtacctgatggagtagtttgctttttcacc
tcatatttgtatatggagtcggtggttgctgcctggtatgatcagggagtaatcgatagt
ttacaaaggtataagttgctgttcattgagactcaggattcagctgagactagtctcgcg
ctgatgtattatattaaggcatgcgaatccggccggggagcagtgctcctgtctgttgct
cgcgggaaagtctccgaaggagtagatttcgatcaccatttaggccgtgctgtcctcatg
ttcggcatcccctatgtctacactcaatccaggatactaaaggcgcgtcttgactatctg
agggatcaattccagataagggagaacgatttcttgacttttgatgcaatgagacatgcc
gcccaatgcgtgggccgtgccattcgaggcaaaactgactatggtataatgatattcgcg
gacaaacgttttgctaggattgataaacgttcgaagctgcctaagtggattcaggaacat
ttaaaagacagtttatgcaatctttccactgaggaagcggtgcagattgccaagaggtgg
ttgaggcagatggcgcaaccgttcacgcgggaggaccagttgggagtctcgttgctgact
ttggaacagctgcagaccatggagcagaaaaagttagaagagcaaactcacgaggaaatg
gaaatttga
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