Euwallacea fornicatus (polyphagous shot-hole borer): 136349655
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Entry
136349655 CDS
T10685
Symbol
Ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136349655 (Ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efor03021
]
136349655 (Ssu72)
03019 Messenger RNA biogenesis [BR:
efor03019
]
136349655 (Ssu72)
Enzymes [BR:
efor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
136349655 (Ssu72)
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136349655 (Ssu72)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136349655 (Ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
136349655
NCBI-ProteinID:
XP_066157440
LinkDB
All DBs
Position
39:1039636..1041063
Genome browser
AA seq
195 aa
AA seq
DB search
MSAVSNLRIAVICSSNMNRSMEAHAFLSKKGFLVQSFGTGDKVKLPGSAADKPNIYDFGT
SYEEIYQDLLDKDKSLYTQNGLLHTLDRNRRIKSHPEKFQESKEKFDILITCEERVYDQV
IDFMESKTPSDNSIVHVINIDIQDNLEEATIGAFLISDLCMHIATTEDLDNDIEEVLHAF
EEKCQRPILHSIVFN
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagtaagcaacttacgaattgctgtaatatgctccagcaacatgaaccgaagc
atggaagcccatgcttttctgtccaaaaagggttttctagtacagtcctttggaactggc
gacaaagtaaagttgccaggctctgcagcagataaacccaatatttatgattttggaacc
tcttatgaggagatttatcaagatttattagataaagacaaatctttatatactcaaaat
ggtcttcttcacactctggacagaaatcgaaggattaaaagtcatccagaaaagtttcag
gaaagcaaagaaaaatttgacattttgattacttgtgaagaaagagtatatgaccaagtg
atagactttatggaaagcaagactccatcagataattcaatagttcatgtaattaatata
gatatccaagataacttggaggaagctactataggagcttttttaattagtgatctatgt
atgcatatagccaccacggaagatttagacaatgacatcgaagaagttcttcatgccttt
gaagaaaagtgtcaaagacccatattgcacagtattgtctttaactga
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