Euwallacea fornicatus (polyphagous shot-hole borer): 136350237
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Entry
136350237 CDS
T10685
Symbol
Rcd-1
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136350237 (Rcd-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136350237 (Rcd-1)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136350237 (Rcd-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
136350237
NCBI-ProteinID:
XP_066157874
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Position
2:7363461..7368244
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AA seq
297 aa
AA seq
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MSSQQSPANTSVEREKVFQWILELTNPDTRENALFELSKKREIVPDLAPMLWNSFGTIAA
LLQEILIIYPAINPPTLTAHESNRVCNALALLQCVASHPETRSQFLLAHIPLFLYPFLHT
VSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMETGSELSKTVATFI
LQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLAKEPSARLLKHVVRCYLRLSDNPRA
REALRQCLPDQLRDSTFNVCLQEDKSTKHWLQQLLKNLDSTAGTDPRQVGMSPLGTQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcaacaaagcccagcaaatacttcagttgagagagaaaaagtttttcagtgg
attttagaacttacaaatccagatacccgtgagaatgcattgttcgagctcagtaagaag
agggaaatcgttccagacttagcgccaatgctttggaatagctttggtacaatagcagct
ttgttgcaggaaatactcattatttacccagctattaatcctccaactttaactgcacat
gaatctaatagagtctgtaacgccttggccctcctccagtgcgtggcatctcatccagaa
actcgatctcaattcttactcgctcacatccccttatttctttacccattcttacacaca
gtctcaaaaacgcgcccttttgagtacttaaggttaactagtcttggggtgattggtgcc
cttgttaagactgatgagcaggaggtgataacctttcttttgaccaccgagataattcca
ctttgcctaagaatcatggagactggatctgaattgagcaaaactgtcgctacatttatc
ttgcagaagatactgttggacgacagtggattgtcgtatatttgtcaaacgtacgacaga
tttagccatgtcgccatgatacttggtaagatggtcatatcgttggcaaaagagccgtct
gccagacttttaaagcacgttgtccggtgctacttaagactctctgacaatcctagagct
agagaagctctaagacagtgcctccctgaccaattgcgagacagcacttttaatgtctgt
ctgcaagaggacaagtccactaaacactggctacagcagctgcttaaaaatctggattcg
acggcgggtactgatccacgacaagtcggaatgtcaccattgggtactcagtaa
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