Euwallacea fornicatus (polyphagous shot-hole borer): 136350626
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Entry
136350626 CDS
T10685
Symbol
Chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efor03021
]
136350626 (Chd1)
03036 Chromosome and associated proteins [BR:
efor03036
]
136350626 (Chd1)
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
136350626 (Chd1)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
136350626 (Chd1)
SLIK complex
136350626 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
136350626
NCBI-ProteinID:
XP_066158646
LinkDB
All DBs
Position
3:complement(6551835..6563839)
Genome browser
AA seq
1726 aa
AA seq
DB search
MPESGDESEKSGSGSDSDSSSESQQNSRSDSGSGSSSSGSGSGSDSGEENDNASDNYKSK
IAKDNSQSESQFILSGGEQHSKSDSSNHFQSEADECEPAIRRSARSRKEPERLEDKSTFK
KRDEWKYNDASSSSESEGERERPIPSKRVGARLRPTVQKKKPVRKSRYSSDESSDGYSDG
GKRPRTISRRIAATVSYKEESEEKTDSEDLLDVDQAESTEPVIEEKCETIEKVLGQRRGR
KGITGNITTCYYIEEHEDPNKDTDPHDFDNTEEQYLIKWKDWAHIHNTWESEHSLKDQKV
KGMKKLENFIKKDLEIKHWVKYSSPEDVEYYECQLELTQELLKSYNEVERIIAKYDKPDD
AGTDYYVKWESLPYAESTWEDSGLIKKKWPQKIEEFLEREQSSKTPTRHCKVLRNRPKFL
EVKTQPEYMMGKDMSLVLRDYQIHGLNWMIHSWTKENSVILADEMGLGKTIQTICFLNYL
FHSHHLHGPFLCVVPLSTMTSWQREFAQWAPDLNFVTYLGDVQSREIIRQYEWCYEGSKR
LKFNAILTTYEIVLKDKAFLGSINWAVLLVDEAHRLKNDDSLLYKALMEFDTNHRLLITG
TPLQNSLKELWALLHFIMPTKFDTWEEFEKDHEHASTKGYSKLHRQLEPFILRRVKKDVE
KSLPAKVEQILRVEMTSIQKQYYKWILTKNYIALRKGVKGSTNTFLNIVIELKKCCNHAL
LTKPAEAEPDYNQQDKLQTLLKGSGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILAEY
LQLRHFPFQRLDGSIKGDIRRQALDHFNAEGSPDFCFLLSTRAGGLGINLATADTVIIFD
SDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDHLVIQRMDTT
GRTVLDKKGSNNTNPFNKEDLTAILKFGAEELFKDEDVDEEPNCDIDEILRRAETRDEAP
TMAGDELLSAFKVASFAAFDEDAAPSPISNNVNENDDESKDWEEIIPERLRKKVEEEERN
KEMEDLYLPPRNRKTLQQINQSESDGEGGRKKIKRENDESGGSSLEGEESDDDRPKKRGR
PPAGNREKIKNFTDVEIRRFVKSYKKFSAPLKRLEAVACDAELQEKPLAELRKLGDVLHE
RCVAFMNEQSKENTDANNADGQAKKRLRGPSFKLGGVSVNAKTMMQCEEELAPLDEVLPA
NEEERNRWILEIKTKPAPFDVDWGVKEDTKLLKGIYLYGIGSWEQIKLDPSLNIGDKILL
NEDKKPQAKHLQSRAEYLLKLLKKQLNPNKKPSQKPKRPRKAKEVKDAKSKEIIENDFSS
NDESTMQSSQGTNNNLVNSGSKPKISGHKKDVNNDKGVEGHSKKEKKEKKKSKKEKKAAG
PMHFTANNEPKAINVLGDLDPAIFIECKERMRPVKKALKALDNPDPSMSEAEQVHHTRDC
LIHIGEQINAVLSQYSDPEKIKEWRSNLWYFVSKFTEYDAKKLYKLYKKAKQHDQKSLQK
SEKKADKATKKEKERVQEAASTSKEKERPKKDNDRDDSHHHHHKRKHEPGEISEKDEKPS
KKHRSAMEKKERREKHHNKERKRNRDEVSTEEEGDYRYNRHRGAAPCFRHAIPSLHPDHE
RWVGGSVPRDRFPAEHQRQFNDYPRGPGYHRERDYIRPDKRSPEGKCDWRQYPRDARGMV
PPSLGPRAFYGGSFPASIPSMYVQEGRFVSGDWRPPDRDYYRSRPQ
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagagcggtgatgaatcggaaaaatcgggatcaggatcggatagtgatagttct
tcagaaagtcaacaaaattcgagatctgatagtggatctggatcgtcgagttcggggtcc
ggatctggttcggacagtggcgaagagaacgataatgcttctgacaactacaaatcgaag
atcgccaaggacaacagtcaaagtgaatcccaattcattttgagtggtggcgaacagcat
agcaagtccgactcgtcgaatcatttccagtcagaggccgacgaatgtgaacccgccatc
cgaagatcggcgcgttccaggaaggaacccgagaggttggaagacaagagtacgttcaag
aaacgtgacgaatggaaatacaacgacgctagttcctcttccgaatccgaaggagagaga
gagcgacccattcctagtaaacgcgtaggagcgaggctgcgccccacagtacaaaagaag
aagccggtgaggaaaagcagatacagttctgacgagtcctccgacggttactcggatggg
ggcaaacgtccccgcacgatatcccggagaattgctgcaactgttagttataaagaagag
agtgaggagaaaacggattctgaagacctgctcgacgtggatcaggctgaatctaccgag
cctgtgatagaagaaaaatgtgagactattgagaaggttttagggcagcgtcgaggaagg
aagggcataaccggaaacataacgacctgctattatatagaggagcatgaagatccgaat
aaggatactgatcctcacgactttgacaacaccgaagagcagtacctgattaaatggaaa
gactgggcgcatattcataatacgtgggagtcggagcactcgctcaaagatcaaaaagtg
aaagggatgaagaagctggaaaacttcattaaaaaagatttagaaattaagcattgggtg
aaatattcttcgcctgaggacgtagaatactacgaatgtcagctggagctgacgcaggag
ctattgaaaagttacaatgaagtggaaaggataatagctaaatatgacaagccagatgac
gcagggacagattactacgtgaaatgggagagcctgccctatgcggaatcgacttgggaa
gactcaggtctaattaaaaaaaaatggccacagaaaatcgaggagttcctggaacgagag
caatcgagcaagactccgacacggcactgcaaagtacttagaaaccgaccgaaattcctt
gaagtgaaaactcagccagagtacatgatgggcaaggatatgtccttggtcttaagagac
tatcaaatccacggtctaaactggatgatccattcctggacaaaagagaactcggtaata
ctagccgacgaaatgggtttgggtaaaacaattcagaccatctgtttcctcaactacctg
tttcactctcatcatctccacgggccgtttttgtgcgtagtgccactttcaactatgacg
tcgtggcaaagagaatttgcgcaatgggctccagatttaaattttgttacgtacctcggg
gatgtgcaatccagagaaattattcgtcaatatgaatggtgttacgaaggatcgaaaaga
cttaaatttaatgcaattttaacgacctacgaaatcgtactgaaggataaagctttcctt
ggcagcataaattgggcagtcttattagtcgacgaagctcaccgattgaaaaatgacgat
tctttattgtacaaagctttaatggagtttgacacaaatcatagactgttaataacggga
acgcctcttcaaaatagcctaaaggaattgtgggctttactgcattttataatgccgacg
aaatttgacacttgggaagaatttgagaaggatcacgagcacgcatcaaccaaaggttac
tcgaaattgcaccgccaattagaacccttcatcttgcgccgggtgaaaaaagacgttgaa
aaatctttgcccgcgaaagtggaacaaattctcagagtcgaaatgacatcgattcagaaa
cagtattacaaatggattttaacaaaaaattatatagccctaaggaaaggcgtaaagggc
tcaacgaacacttttttaaatatcgtgatcgaacttaaaaagtgttgcaaccatgcgttg
ctaactaaacccgccgaagcggaacctgactataaccagcaagacaaattacaaaccctt
ttgaaagggtcagggaaattggtgttattagataagcttttaataagacttaaagaaact
ggacaccgggttctaatcttctctcaaatggtacgaatgttagacattctggcggaatac
ctacagctgcgacattttccttttcaacgattagatggtagcattaagggcgatatcagg
cgacaagccctagatcactttaatgccgaaggttctcccgatttttgcttcctgttatca
actcgtgctggaggcttggggataaatttagcaacggcagacaccgtcattatattcgat
tcggattggaatccgcaaaatgatcttcaggctcaggccagggcccaccgaataggccag
aaaaatcaagtcaacatttacaggctagtgaccgccaggagtgtggaagaagagatcgtc
gaaagagcgaagcaaaaaatggtactagatcacttagttatccaaaggatggacactact
ggtcgaactgtcctggacaagaaaggatccaataacaccaatccgtttaataaggaagat
ttaacagccatactaaagttcggggctgaagaattatttaaagacgaagatgtcgatgaa
gaacctaactgcgacatcgacgagatcttgagaagagcggaaactagagacgaagctcca
accatggctggcgatgagctcttgtcagccttcaaagttgctagttttgctgctttcgat
gaagatgctgcaccatcgccaatttcaaataacgtcaatgagaacgacgacgaaagtaaa
gactgggaagaaattatacccgagcgactgcgtaagaaggtcgaagaggaagagaggaac
aaggaaatggaggatctatacttgcctccccggaataggaaaacccttcaacaaataaac
cagtctgaaagcgatggagagggtggtcgtaagaagattaaaagagagaacgacgaatct
ggcgggtctagtctggaaggcgaagagtcagatgatgacagacccaagaagagaggacga
ccacctgcaggcaatcgtgaaaagataaagaacttcaccgacgtagaaattagacgattt
gttaaaagctacaagaaattcagtgctcccttaaaacggctggaagcagtagcctgcgac
gcagaacttcaagaaaaaccactggcagaattgagaaaacttggagacgtacttcacgaa
agatgtgtagcttttatgaacgaacaaagtaaggaaaacaccgatgcgaacaatgctgat
ggtcaagctaagaaaaggttgcgcggtccatcttttaaacttggaggcgtatccgttaat
gctaaaaccatgatgcagtgtgaagaggaattagctccgttagatgaagttttaccggcc
aacgaagaagaacgtaacaggtggatattagaaatcaaaaccaaacctgctcccttcgac
gttgactggggcgtcaaagaagacacgaagttacttaaagggatctacttgtacgggatc
ggttcgtgggaacagatcaagctggacccatctctgaatattggagacaaaatacttctt
aacgaagataagaaaccacaggcgaaacatctgcagtctcgagcggagtacctgttaaag
ttgttgaagaaacagctaaatcccaataaaaaaccctctcagaaaccaaagcggcccaga
aaagctaaagaagtgaaggacgcgaaatctaaagaaataatagagaacgactttagttca
aatgacgaatccacaatgcaaagcagccagggtacaaataataatttggtcaattctgga
agtaaaccaaagatttccgggcataaaaaagatgtgaataatgataagggtgtcgaaggt
cacagcaaaaaggagaagaaagaaaaaaagaagtccaaaaaggaaaaaaaggcagctggt
ccgatgcacttcacggcgaacaacgagccgaaggctataaacgtcttaggagatctggac
cccgccattttcattgaatgtaaggaaagaatgaggcctgttaaaaaggctttgaaagcc
ctggataatccagacccgtctatgtcagaagcggaacaagttcaccacacacgagactgc
ttaatacatattggagaacaaattaatgccgttctaagtcaatattccgacccggaaaag
atcaaagagtggcggagtaatttgtggtattttgtatcaaaattcaccgagtacgatgct
aaaaaattgtacaaattgtataaaaaggccaaacaacacgatcaaaaaagtttgcagaaa
tctgagaagaaagccgataaagctaccaagaaggagaaggagcgggtgcaggaggccgca
tcgaccagtaaagagaaggaacgtcccaagaaagacaatgacagggatgactcgcatcac
catcaccataaaagaaaacacgaacccggtgaaatcagcgagaaagatgagaagccgtcc
aaaaaacatagaagcgctatggaaaagaaagaacgaagagagaaacatcacaataaggag
cgaaaacgaaatagggacgaagttagtaccgaagaagaaggggactacaggtataatcgc
cataggggagctgcaccatgctttagacatgccattccatctctacacccggaccatgaa
agatgggtaggtggaagtgttccaagggatcgatttcctgcggaacatcagcggcagttt
aacgattatcccagagggcctgggtaccatcgggagagagattacatccgacccgataag
agatctccagaaggcaaatgtgattggcgacaatacccaagagacgctagaggaatggta
cctcccagcttgggtcctagagcattttatggaggaagttttcctgctagtatcccctct
atgtatgttcaggaagggaggttcgtgtccggcgactggcgaccccccgacagagattat
taccgcagtcgaccccagtga
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integrated database retrieval system
