Euwallacea fornicatus (polyphagous shot-hole borer): 136350637
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Entry
136350637 CDS
T10685
Symbol
Slip1
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efor04121
]
136350637 (Slip1)
Enzymes [BR:
efor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136350637 (Slip1)
Ubiquitin system [BR:
efor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
136350637 (Slip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
136350637
NCBI-ProteinID:
XP_066158664
LinkDB
All DBs
Position
3:complement(1254313..1342384)
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AA seq
681 aa
AA seq
DB search
MDFIILKVNGTDVSSFPHEDAVRAFMTAQEPIVVEVKRRTTGSPVHSRDGSRYVSTSCQT
DLCGIQWIDEENTIDCFTHDIDLEEVTLRKCSSDEKLGLTVCYSSGSEVDTCTEVYIRDI
APQSVADRDGRLRQGDQILQVNGKDVANKEETESLFAENRKAVTLLVSRCYNRSEEYLDA
EPIDSLTSPNGKSAAYQNSLIEQLVQQQTEAQHSPKNDSPAPKVPSHFIPDKLNLTNSLV
RSKIDSINQEISQLDFRMQNISFKSDKRKAPQLPHIPPPESDTEHIYETIPEDSVIDGEI
EPIYSCPYEPGDDNMIEQWLKVHQEEAWVGTSTKEGINDVEEKEEKKISKSKPPKSNSSG
EEHENSSSAYNTGGSSNSNPLTFELAATQDSKQKNVYRSTLILCPLEEKEDSIKEKEAKN
TCESCKRQAKAKKSKSSSKLVSPSSPTRRVGLSPAHVLSDTMYTNVANLQQTMLLQQQLF
RQALVAQNPEVSSSIKPTTSFTSGSLSQYQFVSGSQSYTTNHQDKSMETKMEWKVKRRPD
GTRYIVRRPVRNRILKNREIRLSEERAGLTTEDDTISELKIGRYWTKEERKKHLEKSRER
KQRQEILTASRHIEEIAEEHIKSSSRKTANNIDNTAKKHRTKSRTHKEKDGHDMVQEVIV
HGQKAPQTNGKMVGLLSVTTV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttattatacttaaggttaatggtacggatgtgagcagtttcccccacgaggat
gccgtcagggcatttatgacagcccaggaacctatcgtcgtggaagtgaagagacgcacc
acaggttctccggtgcattcaagagatggttccaggtacgtgtcgaccagctgccaaacc
gacctctgcggaatccagtggattgacgaggagaatacaatagactgtttcacccacgac
atagatttagaggaagtaactttaagaaaatgcagcagtgatgaaaagctgggcctcact
gtgtgctatagttccggttcagaagtagatacttgtacagaagtgtatattcgggatatt
gcgccacaaagtgtagcggatcgagatggaaggcttagacagggtgatcaaattttacag
gtaaatggcaaagatgtggcaaataaggaggagacggagtcacttttcgctgagaaccgg
aaagccgttactttgctagtcagcagatgttataataggagtgaggaatatttggatgct
gagccaatagattcactgacgtctccaaatggcaaaagtgcagcttatcagaacagtctt
atagagcagctggtgcagcaacaaaccgaagcgcaacattcccctaaaaatgacagtcct
gcccctaaagtaccttcacacttcattcctgataaactcaacctcaccaactccctggtg
cggagcaaaattgactctatcaaccaggaaatttcccaactggattttcggatgcagaac
atttcttttaagagcgacaagcgcaaagctccccaactgcctcatatccctcctccagag
tcagacactgaacacatatacgagaccataccggaggattccgtaatcgatggggagatc
gaacccatctattcttgtccttatgagcctggtgatgataacatgatcgagcaatggttg
aaagtgcatcaggaagaagcctgggtggggacatctaccaaagaaggtattaatgatgta
gaggagaaagaagaaaagaagatcagcaaatctaaacctcctaagagcaacagtagcggg
gaagagcacgagaatagctctagtgcttataatactggaggttcttcaaacagcaatcct
ttgacttttgagctagcagcgacgcaggattccaaacagaaaaatgtttataggtccact
ttaatcctttgtccgttggaagaaaaagaggactcaattaaagaaaaggaggccaaaaat
acctgtgaatcgtgtaagcgacaggcgaaagccaagaagtccaagtccagttccaaactc
gtaagcccttcatcgcccacacgcagagttgggctcagccctgcacatgtcttatcggac
acaatgtacaccaacgtcgctaatttgcagcaaacgatgctcttgcagcaacaacttttt
agacaagctttagttgcgcagaatcctgaggtgagcagcagcattaaacctactacgagt
tttacgtcagggagtcttagtcagtatcagtttgtgagtggatcacagagctacaccacc
aatcaccaggacaaaagtatggagacaaagatggaatggaaagttaaaaggaggcctgat
gggacgagatacatagttagaagacctgttaggaataggatacttaaaaatcgcgaaata
cggctttctgaagaaagagctggtttaaccaccgaagatgacaccatttctgagcttaag
attgggcgatattggaccaaagaagaacgcaagaagcacctagagaaatcccgggaacgt
aaacaaaggcaggaaatactgactgcctcgagacatatagaagaaatagccgaagaacac
ataaaatcgagttcgaggaaaactgccaataacattgataacacagccaagaagcaccgg
accaagtctagaactcacaaggagaaagatgggcacgatatggtgcaggaagtcattgtt
catggccagaaagctccgcagactaatggaaagatggttgggttattgtcggtgactact
gtataa
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