Euwallacea fornicatus (polyphagous shot-hole borer): 136350913
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Entry
136350913 CDS
T10685
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03013
Nucleocytoplasmic transport
efor03015
mRNA surveillance pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136350913 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
136350913 (Hel25E)
03015 mRNA surveillance pathway
136350913 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136350913 (Hel25E)
03041 Spliceosome [BR:
efor03041
]
136350913 (Hel25E)
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136350913 (Hel25E)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136350913 (Hel25E)
Spliceosome [BR:
efor03041
]
Complex C
Other components
EJC/TREX
136350913 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136350913 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Cas9_PI
MoaE
Motif
Other DBs
NCBI-GeneID:
136350913
NCBI-ProteinID:
XP_066159183
LinkDB
All DBs
Position
4:complement(1867673..1872016)
Genome browser
AA seq
423 aa
AA seq
DB search
MADAEDLLDYEDDEQTEQTTNEVGTDAKKAVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMSNVKVGVFFGGLPMQKDEEVLKNNCPHIVVGTPGRILALVKAKK
LNLKHLKHFVLDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSIQRCVALA
QLLTEQNFPAIGIHRGMDQKERLSRYEQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PDDSDTYLHRVARAGRFGTKGLAITFVSEEGDAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcggaagatcttctggattatgaagacgatgaacaaactgagcagaccaca
aacgaggtgggaaccgacgccaaaaaggcggtaaagggtacatatgtatccatacacagt
tccggcttcagagattttcttttgaaaccggagatattacgagccattgttgattgtggt
tttgagcatccatctgaagtccagcatgaatgcatcccacaagcagtacttggtatggac
attctctgccaagccaaatctggtatggggaaaactgctgtgtttgtgcttgccactctc
caacaactggaaccaacagaaaatgttgtttatgtgctggtgatgtgtcacaccagagaa
ttggctttccaaatcagtaaagagtacgagcggttcagcaagtacatgtcgaatgtcaaa
gtaggcgttttctttggtggcctgccaatgcaaaaggacgaagaggtgctgaagaataac
tgcccccatattgttgttggaactcctggacgtattttggctcttgtaaaagccaaaaaa
ttgaatttgaagcatttgaaacattttgtactggatgagtgtgacaaaatgttagagcta
ttagacatgcgacgcgacgtccaggaaatctacagaaatacgccgcacggcaagcaagtt
atgatgttcagtgccactttgagtaaagaaattcgtccagtctgcaagaagttcatgcaa
gatccaatggaagtgtatgttgacgacgaagctaagttgacgttgcatggtctgcagcaa
cattacgtgaaactaaaggaaaacgaaaaaaataaaaaattgtttgaacttttggacgta
ctggagttcaaccaggtcgttattttcgtcaagtcgatccaaagatgtgtagcactggcg
caattattgacggagcaaaacttccccgctattggaatacacagaggaatggatcaaaaa
gagagattgtctagatatgagcagttcaaagatttccagaagcgaattttggtagccacc
aatctatttggacgtggcatggacatcgaacgtgttaacatagtgttcaactacgatatg
cctgacgattcagatacatatctgcatagagtagctagagccggtcgttttggtaccaaa
ggattggccattacgtttgtgtctgaagaaggcgacgcaaaaattcttaacgaagtccag
gacaggtttgacgtaaatattacagaactgccggatgaaatcgatcttagttcatatatt
gaaggacggtga
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