Euwallacea fornicatus (polyphagous shot-hole borer): 136350970
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Entry
136350970 CDS
T10685
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efor04121
]
136350970
Enzymes [BR:
efor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136350970
Ubiquitin system [BR:
efor04121
]
Ubiquitin ligases (E3)
U-box type E3
136350970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
U-box
zf-C3HC4
zf-C3HC4_4
zf-CCHC_2
zf-RING_UBOX
zf-CCHC
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
136350970
NCBI-ProteinID:
XP_066159268
LinkDB
All DBs
Position
4:3904847..3922353
Genome browser
AA seq
1507 aa
AA seq
DB search
MSVHYRFKSALEYDTITFDGLHISVKDLKNAIIQQKRIGKSTDFDLRITNAQTGEVYEDE
NTLIPKNTSLLIARIPVTAPKQKQWEGYGGNITPPSKIDESGALSKATDLANLDAPEEDK
IKAMMSQSTQDYDPSNYLKIRGANQVGPVPTTYRCYKCHQGGHWIKDCPLGQGVEPLEIK
KTTGIPQSFLIPVEGPQVPGAMMTSNGQYAVPALDLQAYTQKQASAPVQQLKPEIPEDLL
CSICSDLLTDAVMIPCCGNSFCDECIRSMLLESEDHECPDCHEKDISPATLIPNRFLRKS
VNNFKNTTGYEKKPIFKPKIANEEPEKKDSTSLPEVDSTAKDSLICEEKTVISEADSTES
GKVGHDPIKEPLMDIVKNVEPEGPPGVSPRQSPVHKISSKVTRGADRDRSSRDRGHHGGK
RGSPKHHRSRSPSPRKSRTRHSPNYERRIRSPETPTRDDVPPGIGTNYPIPPPRPMPGMS
LGDVLQGGPGNGMPPGAPPMQGPPPGMPPGVYTHGQPPPFIPPGAPPNYRLPPPGAQPPP
YMPPGPGQYAPRPAFDPINGPPGNFGPSFPGRPREFGGRRNGRDRTPPGVIDDPLAAFNR
ILREKDEKRARAQRMARRSWSRSRSRSFSRSPPPMRRRSRSPRRRMSRSRSRSFSLSRSR
SRSYSPRPSPRGSPHPPPRRSPPPLQSRRGPPGRFRSPNRLSSPPRRRVDRVDFDREYDR
GPFREKPRDRRGDSRDRFYDDRERDYERSSVRGRGPPPPGPMANQPPQWGPQRDPYYPEQ
PHPGYQNRYPQQMLHIQSERKYEAIAPPGVEQPPIPGLESEFPPVNKIDKQRHTPPRQER
DRHHSPREKEDRHRDRDRDRDRDRDRDREKRDRDRKKEVKRSRSKTPDPWRNPSPKSSGT
PEKPKKRRSSIEPKEERKKDKDRHKDPSDEEKKKGKEKKRHKEKKEEKKKKKEKKDKHRH
KSKDRSKKEEFKQVIPRQSIGTDEESEEVRKKIEERKKQKEEEERKKLEEERKKEERRLR
FIEDEKRKREEETRKEEAKRKAIEEARKLLEAEEQARVEKHEKEQELEQQREIEERKMQE
GIETENLKSIDLYDEVIPEKDLVREVRDDFSLFEKNREECPENEFPQERLNNVQEGTQSD
EHTEFPKFGEEEDTGILELHSDMDIKLDESDILAPFPEKSKWEVDEDGQIQNSPGDTSKD
FMDPSTKVSSEVLKRAENVIFARAINSIRPIEIKKIGGERVKVYADEKNPEKTKIEVPVE
KPRLSIKERLGKKVDDPEPGVVLVDNRRSSSPFNRRERRIAIEGHRRHDRRNRSRDRDRH
RSHNDKSSDKSKRTKREEKEKHDDRSREKRKRSRSRSENKELKKKKDRKSKKEKTKKFEE
GKSEEKSEDMLKSAVDKRKSTLDEANFEPDYDLETHDDEANEKGNKKEKEARKGTVIEQD
SSSSESSSSSSEEDRKRKRRKSKKKRKRKDSTCSDSDSSSESSESDKDRKKKKHKKTKKK
KKRSKHK
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcattatagatttaagtctgctttagaatatgatacaataacctttgatggt
ttgcatatatcagtgaaagatctgaaaaatgccatcatacaacagaagcgtattggaaaa
agtactgattttgatctgcggattaccaatgcccaaactggagaagtatatgaagatgaa
aataccttaattccaaaaaatacttcgttgttaattgcaagaatccctgtcactgcacca
aaacagaaacagtgggaaggatatgggggcaatattactcctccctccaaaattgatgaa
agcggggccctcagtaaagcaactgacttagcaaatcttgatgctccagaagaagataaa
attaaggctatgatgtcgcaaagcactcaagattatgatccaagcaattatttaaaaata
cgtggtgctaatcaagttggtccggtacctactacttatcgctgttacaaatgtcatcaa
ggagggcactggataaaggattgtcctctaggacaaggagtggagccacttgaaattaag
aaaactacaggcattcctcaaagtttccttatccctgttgaaggcccacaggttccaggt
gctatgatgacctcaaatggtcaatacgcagttcctgctttggatctgcaggcctatact
caaaaacaagcttcagccccagtacagcagctcaaacctgagattccagaagatttgctt
tgttccatttgttcagatctgctaacagatgctgttatgattccctgttgtggaaattcc
ttttgtgatgaatgcataagaagtatgctgctggaaagtgaagatcatgagtgccctgat
tgtcatgaaaaggacatttctccagcaacattaattcccaataggtttttgcgaaaatct
gttaataacttcaaaaataccactggctatgagaaaaaacccatttttaaacccaaaatt
gcgaatgaagaaccagagaagaaagactcaacttccttacctgaagtggattctacagca
aaagattccttaatatgtgaagaaaagactgtaatttctgaagcagattctactgaatct
ggcaaggttgggcatgaccccataaaagaaccattaatggacattgtcaagaatgttgag
cctgagggtccaccgggagtttcgcccaggcagtcacctgttcacaaaatctcaagtaaa
gttacacgtggtgctgatagagacagatctagtagagatcggggacatcatggtggcaaa
agaggctctccaaaacatcacaggagtaggtcaccatctcccaggaaatcaagaactagg
cattctcctaattatgaacgaaggattcgttctcctgaaacgccaactagagatgatgtg
cctccaggaataggaacaaattatcctattccaccaccgcgaccaatgccaggaatgtca
ttgggggatgttttacagggtggaccaggaaatggtatgccacctggtgcaccacctatg
cagggtcctccgcctggtatgcctcctggtgtatacactcatggccagcctccaccattt
attcctcctggagcgccaccaaattaccggttgcctccgcctggtgctcaaccgccaccg
tacatgccccccggtccagggcaatacgctccgagacctgcatttgatcctatcaatggc
cctcctgggaacttcggaccgagttttcccggcagaccgagagagtttggcggccgtcga
aacggtagagataggactccgccaggagttattgatgatcctttggctgcatttaatcgc
atattgcgcgagaaagatgaaaaacgggctagggcgcagcgcatggcacgacgcagttgg
agtcgcagtcgcagccgcagttttagccgatccccaccgccaatgcggagacgcagcaga
agtccgaggaggcggatgtcaaggagtcgaagtcgatccttctctttgagcaggtcgcga
tcgcgctcgtattctcctaggccgagcccgagaggctccccacatccgcccccgaggagg
tccccacctccactgcagtcgaggaggggtccccccgggcgattcagatctccgaatcgg
ttgtcctctcctccaaggcgacgtgtggaccgtgtcgatttcgatcgcgaatatgatcga
ggcccattccgagaaaaaccaagagatcgtagaggagacagtcgtgaccggttttatgat
gatagagaaagagattacgaacgtagcagtgtcagagggagaggtcctcccccacctggt
cccatggccaaccaacccccacagtggggccctcagagagacccttactatccggagcaa
ccgcatcccggctatcagaacaggtaccctcagcaaatgcttcacattcagtcggaaaga
aaatacgaagcgatcgccccgccgggcgttgagcaacctcccattcctggccttgaaagc
gaattccctcccgttaataagatagataaacaaagacacacccctcctcgacaagaacgg
gatagacatcatagtcctagagaaaaggaagatcgacatagggatagggacagagatagg
gatagggatagggatagggatagagaaaaacgagatcgtgacaggaagaaggaggttaag
cgctcaagatcgaaaactcctgatccgtggcgaaatcctagccctaagtcgagtggaact
ccagaaaaaccaaagaaaaggcgcagttctattgagcctaaagaagagagaaagaaagat
aaagatcgccataaagatccttctgatgaagaaaagaaaaagggcaaggaaaagaagagg
cacaaagaaaagaaggaggagaagaaaaaaaagaaagagaagaaggacaaacatcgtcac
aaatcaaaagatcggtcgaaaaaggaagaatttaaacaagtaattcctagacagtctatt
gggaccgatgaggagtctgaggaagttcgcaaaaagattgaggaacggaagaaacaaaaa
gaggaggaagaaaggaaaaaactcgaagaagagcgcaagaaggaggagcgacgcttgagg
ttcattgaagatgaaaaacgaaagagagaggaagaaactaggaaagaggaggctaaaagg
aaggcaattgaagaggcacgaaaacttctagaagcggaagagcaagctcgcgtggagaaa
cacgaaaaagagcaggagctagaacaacaaagggaaatagaagaacgcaaaatgcaagaa
ggaattgaaacagagaaccttaaaagcatagatttgtatgacgaggtgatacctgaaaaa
gatctagttagggaagtgcgtgatgacttcagcttatttgaaaagaacagggaggaatgt
ccagaaaacgaattccctcaggaacggttaaataatgtacaagaaggcacgcaatctgat
gagcacacagaatttcctaaattcggagaagaggaagacactggtatccttgagttgcat
tcggacatggacatcaaacttgatgagtcagatatcctggctccttttccagaaaaatcc
aaatgggaagttgatgaagatggccaaattcagaacagtcctggcgataccagtaaagat
ttcatggacccttcgactaaagtatcgagcgaagtcctaaagcgagctgaaaacgtgatt
tttgctagagccattaactcaataaggcccatcgaaattaaaaaaatcggaggggaacga
gttaaagtgtatgcagatgaaaaaaaccctgagaaaacgaagatagaagtaccagtggag
aaacccagactttcgataaaggaacgcttaggcaagaaggtggatgatccagaaccaggg
gttgttttagttgacaaccgccgcagttcctcaccatttaaccgtagagagagaagaatc
gcgattgagggtcataggagacacgatcgcagaaatagaagccgagatagagatagacat
aggagtcataatgataagagtagtgataagagcaaaagaaccaaaagagaggagaaagaa
aaacacgatgatcgttccagggagaagcgtaagcgcagtcggtctcgaagcgaaaacaag
gaattgaagaagaagaaagatagaaagagcaaaaaagagaaaactaaaaaatttgaagaa
gggaaaagcgaagagaagtctgaagatatgcttaagtccgcagtagataaacgcaagtct
accttggatgaggccaactttgagccagactatgacttagaaacgcacgatgatgaggcc
aatgagaagggaaacaaaaaagaaaaagaagcccgtaagggtacggttatcgaacaggac
agtagtagttcagaatcgtctagctctagttcggaagaggatcgaaagaggaaacggcgc
aaatccaagaaaaagagaaagaggaaggatagtacttgcagtgattcagactctagcagt
gagtctagcgagtccgataaagaccggaagaagaagaagcataagaagactaaaaagaag
aaaaagagatcgaaacataagtag
DBGET
integrated database retrieval system
