Entomoplasma freundtii: EFREU_v1c02000
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Entry
EFREU_v1c02000 CDS
T05222
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
efr
Entomoplasma freundtii
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efr03019
]
EFREU_v1c02000 (cbf)
Messenger RNA biogenesis [BR:
efr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFREU_v1c02000 (cbf)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Receptor_2B4
Motif
Other DBs
NCBI-ProteinID:
ATZ16227
UniProt:
A0A2K8NR13
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Position
complement(238837..239841)
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AA seq
334 aa
AA seq
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MKKLHDLKANENDLELLVRIERATLLSGANGQNYLILNLVDPSGRLEARRWMVNDYDKEH
LVPNQYIHLTKAVTSEYRGQLQLKINEYAVLTENDLTKFGFKSDDFFVKAPLDVEKHYQD
FKKLVGGFENEVYRKVTLHLLKKYEKEFLRYPAAIFIHHNVHGGLFWHSYTLVKNILAIR
DNYSYANIDWELLIAGAILHDLGKVVEINNIGANDYSLEGKLIGHISLGNSQVVQAAHEL
GFIDYENGRQNASVTLLEHLILASHGKHDFGSPVEPHTIEAVILSTFDNLDARIYRTNEE
ISKVNLFSWTPKLPSEDNKMFYHHFDKVKAKTKK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttcatgatttaaaagccaatgaaaatgatttagaacttttagtaagaata
gaaagagccactttattatctggagccaatggccaaaattatttaattttgaatttagtg
gatcctagtggtcggttagaagcaagaagatgaatggttaatgactacgataaagaacac
ctcgtacccaatcagtacattcatttaaccaaagccgtgactagtgaataccgtggtcaa
ttacaattaaaaataaatgaatatgctgttttaacggaaaacgatttgacaaaatttggt
tttaaaagcgacgatttttttgtcaaagctcctcttgatgttgaaaaacattatcaagat
ttcaagaagcttgttggtggttttgaaaatgaagtttatcgtaaagtgactttacacctc
ttaaaaaaatatgagaaagaatttttaagataccctgcagcaatctttattcatcataac
gttcatggtggtttgttttgacatagttatacgttagtcaaaaatattctagccattcgt
gataattatagttatgccaatattgactgagagcttctgattgcaggagccattcttcat
gaccttggtaaggtggtggaaattaataacattggtgctaatgattattcattagaagga
aaattaattggacatatttccttaggtaattctcaagtagtccaagctgctcatgagtta
ggttttattgattatgagaatggccgtcaaaacgcctcagttaccttactagaacatctc
atccttgctagtcatggcaagcatgactttggatcaccagttgaaccacatacaattgaa
gcggttatcttatcgaccttcgataatctagatgctcgaatctaccgaacgaatgaagaa
ataagtaaagttaacctctttagttggacaccaaaattgccaagtgaagataacaagatg
ttttatcaccattttgacaaagtaaaagcaaaaaccaaaaaataa
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