Entomoplasma freundtii: EFREU_v1c03060
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Entry
EFREU_v1c03060 CDS
T05222
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
efr
Entomoplasma freundtii
Pathway
efr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFREU_v1c03060 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efr03400
]
EFREU_v1c03060 (recD)
Enzymes [BR:
efr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EFREU_v1c03060 (recD)
DNA repair and recombination proteins [BR:
efr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFREU_v1c03060 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
OB_YrrC
HHH_RecD2
AAA_12
nSTAND3
T2SSE
HHH
RsgA_GTPase
AAA_16
AAA_29
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ATZ16332
UniProt:
A0A2K8NR72
LinkDB
All DBs
Position
359407..361716
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AA seq
769 aa
AA seq
DB search
MGTMPLSNEPKKLEGEETTLKIYRGYLTKFLMQKGCTWGLGLFASEDNDKSQIRIKGHIT
NMKTRVLYEIRGHMETHNKYGTTFEVESYAVADTLTQKAAIRYLSGATFPGIGRKTAEMI
VDYYQDDTIRKIKRHPESLREVPNLPPHLAEIIIGRLKQSPLEDLRQTFFENNLSVPLLE
KITDLTNDSEEIRELFVNDFYSFARNNNLKPIAKIDEIALFFGEDKNSPNRIGHWAEAVA
LQTIFNSGHTYLDLDTLKKALQKRLNIYDEIIIRDGLMYAKKNRLLYFEKGKIYPRESWE
DEETISQGLADLLQPTLKLTAVSKTRFNQVLKKVELELGKILNINNFHFDDGQIEALRMF
LKEPVLIVSGGPGTGKSTLIYGFILLYRYLFNHPPVGVATPTGRASARLKDIVEGLNPST
IHKLLEANENGTFGFNEDRPLNFEFMVLDEMSMVDNHVFAQFLKAKGPLKKLVLIGDFNQ
LPPVNYGNLFAELATNKNFAFIKLKTIHRQQKGNGIIDLASHIENGTLESLDWHNLGNVE
TYFDQSSQDNYKTLQLDYQLHLNNIEKFANAYQIITPFYAGSLGIENLNNFIQASFNPAL
VDKKTTKSKTYHRGFYTYALNDKVMCLKNNSEQDLTNGEIGTIQDLSFLDQKLHQASVKF
GDHKLVNLTPDQFDDLALGYACSVHKTQGSEYQRVVLILESSSRNFFLNRKLIYTAITRA
KEELLIIGDEKVLLEACKREPKPRFSTLGVKIEEKLQKKQQSKNNKEEE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaatgccactttcaaacgaacctaaaaaacttgaaggagaagaaactactctt
aaaatttaccgtggttacttaacaaaatttttgatgcaaaaaggttgtacttgaggcctt
ggattattcgcgagcgaagataatgataaatcgcaaattcgaattaagggtcatattact
aatatgaagacgcgtgtgctttatgaaattcgtggccatatggaaactcataataagtat
ggtactacctttgaagtggaaagttatgcagtcgctgatactttgacccaaaaagcggct
attagatacctttctggagccacgttccctggcatcgggcgtaaaacagctgaaatgatt
gttgactattaccaagatgacacaatccgcaaaattaagcgtcatcccgaaagccttagg
gaggtgcctaatttaccacctcatttagctgagattattattggccgactaaagcaaagt
cctttggaagatttgcgccaaactttttttgagaataacttgagtgttcctttattggaa
aagattactgatttaaccaatgattctgaagagattcgtgaactctttgtgaatgatttt
tatagttttgcgcgcaacaataatttaaaaccaatcgcgaagatagacgaaatcgctctc
ttctttggcgaagacaaaaatagtcccaatcgaattggccattgagccgaggctgtggct
ctacaaactattttcaattctggtcatacttatttggatttggatactctaaaaaaagca
ctccaaaagcgattgaatatttatgatgaaatcataatcagagatggtttaatgtatgct
aaaaaaaaccgcttgctttactttgaaaaaggtaaaatttatccccgcgaatcttgagaa
gatgaagaaaccatttctcaagggcttgccgatttgctgcaaccaacccttaaactaacg
gctgtttccaaaacgcgttttaaccaagttttaaaaaaggtggaactggaacttggcaag
attttaaatataaataattttcattttgatgatggccaaattgaagccttaagaatgttt
ttaaaagaaccagtattaatcgtttctgggggacctggaactggaaaaagtaccttgatt
tatggttttattttactttatcggtacctattcaatcatcctcctgtgggcgttgctact
ccaaccggaagagccagcgctcgtttaaaagacatcgttgaaggtttaaacccgtcaacg
attcataagttacttgaggccaacgaaaacggtacttttggtttcaatgaggatcgtcct
ttaaactttgaatttatggttctagatgaaatgagtatggttgataaccatgtctttgcg
cagttcttaaaagccaagggacctttgaaaaagctcgtcttaattggggattttaaccag
ttaccaccagtcaactatggaaatctctttgctgaattagcaaccaataaaaattttgct
tttatcaaattgaaaactattcatcgtcaacaaaaggggaatggaattatcgatttagca
agccatatcgaaaatggaaccttagaaagtttagactgacataacttaggcaatgtggaa
acgtattttgaccaatcatcgcaggataattacaaaaccttacaacttgattaccaactt
cacttaaacaatattgagaaatttgctaatgcttaccaaattattactcctttttatgct
ggatccttaggaattgaaaacctgaataattttatccaggctagttttaatccagctcta
gtggataagaagacaaccaaaagtaaaacttatcatcgtggtttttatacttatgcctta
aatgataaagtgatgtgtttgaaaaataatagtgagcaagatttgactaatggagaaatt
gggactattcaagatttaagttttttagaccaaaaattacatcaagcaagtgtaaagttt
ggtgatcataagttagttaatttaactcctgaccaatttgatgatttagccttagggtac
gcttgtagtgttcataagacacaaggaagtgaatatcaacgtgttgtcctgatattagag
tcaagttcacgtaattttttcttaaatcggaaactaatttatacagcgattactcgtgct
aaggaggaattgttaattattggcgatgaaaaggttcttttggaagcttgtaagcgcgaa
ccaaagccacgttttagtactttaggagttaaaatagaagagaaactgcaaaagaaacaa
caaagtaaaaataataaggaagaagaatag
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