Entomoplasma freundtii: EFREU_v1c03350
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Entry
EFREU_v1c03350 CDS
T05222
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
efr
Entomoplasma freundtii
Pathway
efr03030
DNA replication
efr03430
Mismatch repair
efr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFREU_v1c03350 (holA)
03430 Mismatch repair
EFREU_v1c03350 (holA)
03440 Homologous recombination
EFREU_v1c03350 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efr03032
]
EFREU_v1c03350 (holA)
03400 DNA repair and recombination proteins [BR:
efr03400
]
EFREU_v1c03350 (holA)
Enzymes [BR:
efr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFREU_v1c03350 (holA)
DNA replication proteins [BR:
efr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFREU_v1c03350 (holA)
DNA repair and recombination proteins [BR:
efr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFREU_v1c03350 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ATZ16361
UniProt:
A0A2K8NUB6
LinkDB
All DBs
Position
complement(393419..394405)
Genome browser
AA seq
328 aa
AA seq
DB search
MDLIYSPDYYLLLEAQKQKIKELQLDSETIETFSFIDNSLAEIIDSLLTLPMFSKQKIII
IHDSWFLTNKKIALHPTFNFDSLLTLLNRGLPDANKVIFTLNHETLAKNKKSQNFIRQVK
VNKIDSPTLSFCQTKVKEWLEESKINFSADAWKYFWTIMPLDLSYLEKEIGKLVNLEAPE
ITLEMTKQISFPWLENDIFKLSEAFLRNDCSNFLTLYKDYCLQNNELIPLLALLGNHLIT
LRNYLVLKEKGLYHQEIIQKLGVNPYYLNNILRINNETIAQLNGKIDMIYELNRELICGA
IDTRVIPEYKFIKAFEKSKRKDKNNGAK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatctatagtcctgactattatttattattagaagcccagaaacagaaaatt
aaagaacttcaattagattcagagacaattgaaacattttcttttattgataactctttg
gcagaaattattgatagtcttttaacgttaccaatgtttagcaagcaaaaaataattatc
atccatgactcttggtttttaacaaataaaaaaattgctttgcatcccacctttaatttt
gatagtctattgacgcttttaaatcgggggcttcccgacgctaataaagtcatctttaca
cttaatcatgaaacacttgcgaaaaacaaaaagtcccaaaattttattaggcaagtaaag
gtaaataaaattgattcaccaactttgagtttttgtcaaaccaaagttaaagaatgatta
gaagaatccaaaattaacttttctgctgacgcctggaaatatttttggacaataatgcct
ttagacctttcatatttagaaaaggaaattggtaaattggtaaatttagaagccccggaa
ataactttggaaatgaccaaacaaatttccttcccatgattagaaaatgacatctttaaa
ttaagtgaagcctttttgcggaatgattgcagtaattttttaaccttatataaggattat
tgtttgcaaaacaatgaattaattcctttgttagcccttttgggcaatcatcttatcaca
ttaagaaactatttagtgttaaaagaaaagggcctctatcatcaagaaataattcaaaaa
ttgggagtaaacccctactacctaaacaacattctgcgcataaataacgagacaatcgcg
caattaaatggtaaaattgatatgatatatgaacttaatagagaactaatttgtggagcg
attgatacacgcgtaattcccgaatataaatttattaaagcgttcgaaaagtcgaaaaga
aaggacaagaataatggagccaaataa
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