Entomoplasma freundtii: EFREU_v1c03530
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Entry
EFREU_v1c03530 CDS
T05222
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
efr
Entomoplasma freundtii
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efr03019
]
EFREU_v1c03530
03009 Ribosome biogenesis [BR:
efr03009
]
EFREU_v1c03530
Enzymes [BR:
efr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFREU_v1c03530
Messenger RNA biogenesis [BR:
efr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFREU_v1c03530
Ribosome biogenesis [BR:
efr03009
]
Prokaryotic type
rRNA helicases
EFREU_v1c03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PhoH
BrxL_ATPase
AAA_22
Helicase_C_2
NLRC4_HD2
Motif
Other DBs
NCBI-ProteinID:
ATZ16379
UniProt:
A0A2K8NRD3
LinkDB
All DBs
Position
complement(420734..422149)
Genome browser
AA seq
471 aa
AA seq
DB search
MPKSTKPDALKKATSKPKINDFTNFGFKKFVNEALRAHNFKKPTAIQEAVIPLLKKHQNV
IALAPTGTGKTHAFLLPLLNNLHQSPNETVQCVIVVPTRELGQQIFEETRLILKNQPDFK
SQLFVGGNDYQKEVASLTNKQPTVVIGTPTRLKELYVDQALKLTTAQSLVVDEVDMIFDY
GFLEDLDFLLNKMNPRLQVAFFSATISQELSQFLKKYSKNSVFINQTPLRQQNPNVEHFL
VETKDQALATTFNQLLATIEPFLALIFVNSKDQVPEIVKILHDFGINEVGELHSNLSPRT
RDAMLKRLKNNEFQYLVATDIAARGLDFPGASHVISVNLPRDWHYYIHRSGRTGRNGAHG
VSYVLKTFDNQKQIDQLQNKGLNFTLLKFNQGSWQSITAKKNKKNPQNLDSESKQVLNRY
ANKKVKPGYKRKRKEELDTIKKNRRRQHIKESIQKIKKEKYKQRRSTLFDD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatcaactaaacctgacgctcttaaaaaggcaacttctaaacccaaaataaat
gattttacaaattttggttttaaaaaatttgttaatgaagcacttcgagctcataacttt
aaaaaaccaaccgctattcaagaagcggttatccctctcttaaaaaaacaccaaaacgtg
attgctttagctccgactggaacgggaaaaacacacgcttttttgctaccgttattaaat
aatcttcaccaatcaccaaacgaaaccgttcaatgtgttattgtggtccccacaagagaa
ttgggtcaacaaatttttgaagaaactcggttaattttaaaaaaccaacccgattttaaa
agtcaattatttgttggaggaaacgattatcaaaaagaagtagctagtctaaccaataag
caaccgacagttgttattggtactcccactcgtcttaaagaactctatgtagaccaagct
ctcaaactaactactgcccaatcattagtcgtcgatgaagtcgatatgatttttgattat
ggtttccttgaagatttagattttttgttaaataaaatgaacccccgtcttcaagtggct
ttcttttccgctactatttcacaagaactgagccaatttttgaaaaaatattccaaaaat
tccgttttcattaaccaaacaccactcagacaacaaaatccgaatgtcgaacacttttta
gtcgaaactaaagatcaagctttggcaacaacatttaaccaattgcttgccacaattgaa
ccgtttttagctttgatatttgttaatagcaaggatcaggttccagaaatagtcaaaatt
cttcatgattttggcattaatgaagtaggggaacttcatagtaaccttagccctcgcact
cgtgatgcgatgttaaaacgcttgaaaaacaatgaattccaatatttagtagcaactgac
attgccgcccgtggcctagattttcctggagctagccatgttatttcggtaaatttaccg
cgtgattgacattattatattcatcgttctggcagaacaggtcgtaatggtgctcatggt
gtaagttatgtcttaaaaacttttgataaccaaaaacaaattgatcaacttcagaacaaa
ggcttaaattttactcttttaaaatttaatcagggttcttggcaatcaatcacagctaaa
aaaaataaaaaaaacccccaaaatctggattcggaaagtaagcaagtcttaaaccgttac
gctaataaaaaggtgaaacccggttataaaagaaagcgtaaggaagaattagacaccatt
aagaaaaaccgtcgtcgtcaacatattaaagaatctattcaaaaaattaaaaaagaaaag
tacaaacaacgtcgtagtaccctttttgatgattaa
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