Entomoplasma freundtii: EFREU_v1c04500
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Entry
EFREU_v1c04500 CDS
T05222
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
efr
Entomoplasma freundtii
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efr03016
]
EFREU_v1c04500 (truB)
Enzymes [BR:
efr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EFREU_v1c04500 (truB)
Transfer RNA biogenesis [BR:
efr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EFREU_v1c04500 (truB)
Prokaryotic type
EFREU_v1c04500 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF2589
Motif
Other DBs
NCBI-ProteinID:
ATZ16476
UniProt:
A0A2K8NSE3
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All DBs
Position
complement(542302..543180)
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AA seq
292 aa
AA seq
DB search
MKHDGIFVVDKPVGLSTNAVIQTIKRNLKIKKVGHAGTLDPLASGVVICLVNEATKLSNF
LLQADKSYLVTMKLFEGTDTYDAEGKTIQQDEPFFISEQEIKNVFQTFDGLTYNQTPPIY
SAIKVNGKKLYDYARQEQEVEIKQRQVTIKSLKLVDITPMTITFETNVSKGTYIRSLVVD
IAKALNTTAHVTSLRRLSSGPFNISEAVSLETINWSDLLDLTTALTQSGQSIKIAPNVTK
VRQGQKIIMPNSQEDLVFLSDPAGRLLACYERSGNKGESDVFVCKRGLNLEE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgacggaatttttgtcgttgataaaccagttggtttatcaacaaatgcagtt
atccaaactatcaaacgaaatttaaaaattaaaaaagttggtcatgcaggtactttagat
ccgttagcaagtggtgtcgtgatttgcttagtcaatgaagcgactaaattatctaatttc
cttctccaagcagataaaagttatttagtaacaatgaaattgtttgaggggactgatact
tatgatgctgaaggaaaaactattcaacaggatgagccttttttcatttctgagcaagaa
attaaaaatgtttttcaaacctttgatggtttaacctataaccagaccccaccaatttat
tcggccattaaagtcaatggcaaaaaactttatgattatgctcgacaagagcaagaagta
gaaattaaacaacgtcaagtaactataaaaagtctaaagttagttgatatcaccccaatg
actatcacttttgaaacaaatgtatccaaaggtacttatatcagaagtttggtagttgat
attgcgaaagctttgaacaccaccgcgcatgtgacctctttaagacgtttaagttccgga
ccatttaatattagcgaagccgttagtttagaaaccattaactggtctgatttacttgac
ttaacaactgcactaactcagagtggccaatcgataaagattgctcctaatgtaactaaa
gttaggcaaggtcaaaaaattatcatgcctaacagccaagaggatttagtttttctaagt
gatccagcaggacgcctcttagcctgttatgaacgtagcggaaacaaaggcgaaagtgat
gtatttgtttgcaaaaggggacttaatttggaggaataa
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