Entomoplasma freundtii: EFREU_v1c06610
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Entry
EFREU_v1c06610 CDS
T05222
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
efr
Entomoplasma freundtii
Pathway
efr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EFREU_v1c06610 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efr03021
]
EFREU_v1c06610 (rpoC)
03400 DNA repair and recombination proteins [BR:
efr03400
]
EFREU_v1c06610 (rpoC)
Enzymes [BR:
efr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EFREU_v1c06610 (rpoC)
Transcription machinery [BR:
efr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EFREU_v1c06610 (rpoC)
DNA repair and recombination proteins [BR:
efr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EFREU_v1c06610 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ATZ16681
UniProt:
A0A2K8NVA7
LinkDB
All DBs
Position
complement(788308..792063)
Genome browser
AA seq
1251 aa
AA seq
DB search
MAFNKSKKAIKIELASPETIRSWSHGEVLKPETINYKSLKAEKDGLFDERIFGPTKNFEC
ACGKYKKANPMNKGKICEKCGVELTESIVRRERMGHIELEEPVTHIWMLKVAPSRIATLL
DLKAKELEEVVYFVSHIVLEVGDIKNLKVGEVLDLGWSSASKTREKLAVIIKSIIAKIDD
ENSRDYKKATRLLSELDNTNVPFSIDEATNLITKYTGAKFGIGAEAVEYLLKKIDIDGTI
VKLKDELAEKRGSMEQTKIMRRLEVLDALKKSGAKPEWMILRVLPVIPPDIRPIIQLDGG
RFTTSEINDLYRRIIIRNERLKKIKEMGAPSIIINNEKRMLQEAVDALLDNERKPRPVVG
KDKRPLKSLTSTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKMYQAGIPRDMAIVLFK
PFVIQWLQEHDHADNVKVAEKMIQQNDPHIWEALEQVIKDRPILLNRAPTLHRLGIQAFE
PKLVKGKAIRLHPLVTSAFNADFDGDQMAIHVPITKEAVGEARALMSGANAILGPKDGKA
IVTPTQDMILGNYYVTLEEKGVSGEGMMFYDAQEAIRTYEMGNLNLNALIGIAVKGLNSN
KFPRGSENKYILTTVGRLIFNNIFEEPFPWLNSPKISEAENEIHKYLFDFSEDIVDAIEH
HEISQPMKNSELSLIIEKYFEKYGSRKTAQMLDNMKDVGYYFSTKSGTTISAGDVVAYTK
KYDEFKEADKKVNEITDFYNQGMLTANEKKQRVIGVWSELKDNIQKELSNILKQDPKNPV
FVMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLTVSEYFISTHGARKG
MADIALKTADSGYLTRRLVDVSQEIVVTSDDCFATTGFNVGAIVDTKHDNVIVPLKDRLV
GRYSFDDIEDEAGNIIVPKDTLITKDLAAKIVAAGIKNVTIRSVLTCEESRGVCKKCYGV
DLATGEVVKYGEPVGVVAAQSIGEPGTQLTMRNFHTGGVAGDADITQGLPRIKELLDVTA
PKGSVAIISEIEGEVQDITDEDGFYTITIVNDWETKKYHTQFHAILRVKVGDKVQLGQKL
TEGAIDLRQLLEVARVEDVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVRVIDGM
DSELLPGEVLTTQAYKASVATALMEGKKPALVKPVIFGIKKAPLESSSWLSSASFQDTAR
VLSKAIIRGKVDHLEGLKENIMLGNLIPAGTGLTGAEAVMALGEEYHKNEY
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaataaaagtaaaaaggcaatcaaaattgaattggcatcgccagaaacaatt
cgctcatgatctcacggggaagttttaaaaccagaaacaattaactataaaagtttaaaa
gccgaaaaagatggtctttttgacgaacgaatttttgggcctactaaaaactttgaatgt
gcctgtgggaaatataaaaaagccaacccaatgaacaaaggaaaaatttgtgaaaagtgt
ggggttgaattaactgaatcaattgtccgtcgtgaacgtatggggcatattgaattagaa
gaaccggtaactcacatttgaatgctgaaggtggctccttcaagaatcgccactttgtta
gatttaaaagcaaaagaattagaagaagtagtttactttgtttcacacattgttttagaa
gtcggtgatattaaaaatcttaaggttggagaagtattggatcttgggtgatcaagtgct
tcaaaaacccgtgaaaaattagcagtgattattaaatcaattattgccaaaatcgatgat
gaaaattcacgtgattataaaaaagctactcgcctattatcagaacttgataatactaat
gtgccgttttcaattgatgaagccacaaacttaattactaaatatactggggctaaattt
gggattggagctgaggctgttgaatatcttttgaaaaaaatcgatattgatggaacaatt
gtcaaattaaaagatgaactagccgaaaaacgtggttcaatggaacaaaccaaaatcatg
cgtcgtctagaagttctagatgctttgaaaaaatcgggagcaaaaccagaatgaatgatt
ttaagagttttacccgtaattccaccagacatccgtccaattatccaattagatggtggt
cgatttactacttcggaaattaacgacctttaccgtcgtattatcattcgtaacgaacgt
ttgaaaaaaatcaaagaaatgggtgcaccgtcaatcattattaataatgagaaacgtatg
ttgcaagaggctgttgatgctttattagataacgaacgtaagccgcgtcctgttgtcgga
aaagacaaacgacctttgaaatcattaacttcgactttgaaagggaaacaagggcgcttc
cgtcaaaacttattaggaaaacgtgtcgattattctggacgttcggtaattgttgtcgga
ccaaccttgaaaatgtatcaagccggaattcctcgtgacatggcgattgtgcttttcaag
ccgtttgttatccaatgattacaagaacatgatcatgcagataatgtaaaagttgctgaa
aaaatgatccaacaaaatgaccctcatatctgggaagctttagaacaagtcattaaagac
cgcccaattcttttaaaccgggcaccaactttacaccgtttaggaatccaagcttttgaa
ccaaaactagttaaaggtaaagcaattcgcttacatccattagtaactagtgccttcaat
gccgatttcgatggggaccaaatggctatccatgtgcccattacgaaagaagcggttgga
gaagcccgcgccttaatgtcgggtgccaatgcaattttgggacctaaggatggtaaagcc
attgttactccaacccaagatatgattcttggtaattactatgtaaccttggaagaaaaa
ggtgtctcaggtgaagggatgatgttctatgatgctcaagaagccattcgtacttatgaa
atggggaacttgaaccttaatgccctaattggaattgctgttaaaggtttaaatagtaac
aaatttccacgcggtagcgaaaataaatatattttaactactgtagggcgcttaatcttt
aacaacatttttgaagaacctttcccctgattgaattcaccaaaaatcagcgaagctgaa
aacgagattcataaatatctctttgattttagtgaagatattgtggatgctattgagcac
cacgaaattagccaaccaatgaaaaatagcgaactttcgttaatcattgaaaaatatttc
gaaaaatacggttcacgtaaaacagctcaaatgttagataacatgaaagacgttggttac
tatttctcaactaaatcaggtactaccatctctgctggcgacgttgttgcctatactaaa
aaatatgacgagttcaaagaagcagataagaaagttaacgaaatcactgatttctataac
caaggaatgttaactgctaatgaaaagaaacaacgtgtcattggggtatggtcggaatta
aaagataatattcaaaaagaactttcaaatatcttgaaacaagatcctaaaaatccagtt
ttcgtcatggctgattctggagcccgtggtaacgtttcgaacttcacacaacttgtaggg
atgcgtgggttaatgaacgatactaagggggatattaaagaaattccgattaagtcttca
ttccgtgagggcttaacagtgtcagaatactttatttcaactcatggagcccgtaaggga
atggctgatattgccttgaaaactgccgactcaggttacttgactcgtcgtttagttgat
gtttcacaagaaatcgttgtgactagcgatgactgttttgcaactacaggtttcaatgtt
ggagctattgtggacacaaaacatgacaacgtaatcgtgcctttaaaagaccgtttagtt
ggtcgttatagctttgatgacattgaagatgaagccggtaatattatcgtgccaaaagac
actctaattaccaaagacttagcggcaaaaattgttgccgcaggtattaaaaacgttaca
attcgttccgtactaacttgtgaagaatcacgtggagtatgtaaaaaatgttatggtgtt
gatttagcaactggtgaagttgttaaatatggggaaccggtcggagttgttgccgcccaa
tcaattggagaaccaggaacgcaattaacaatgcgtaacttccatactgggggggtagcc
ggagatgccgatattacccaaggtctaccacgtattaaagaattgttagacgtgactgca
ccgaagggttcggtagcgattatttctgaaatcgaaggtgaagtccaagatattaccgac
gaagatggtttctatactattaccattgttaatgattgagagactaaaaaataccatacg
caattccatgctattttgcgtgttaaagttggtgacaaagtacaattgggtcaaaaacta
actgaaggagccattgatcttcgtcaattactagaagtggctcgtgttgaagatgttcaa
aactacatcttgaaagaagttcaaaaagtttatcgtttacaaggaatcgaaatttctgat
aaatatatcgaaatcattgttaaacaaatgttaaacaaagtccgtgttattgatggaatg
gatagtgaattacttcctggtgaagtcttgactactcaagcctacaaagctagtgtagca
acagccttaatggaaggcaaaaaaccagccttggtgaaaccagttatttttggaattaag
aaagcgcctttggaatcaagctcatgattatcttcagcttcgttccaagatacagctcga
gtactttcaaaagcaattatccgtggaaaagttgaccatttagaaggattaaaagaaaac
attatgttaggaaacttaatccctgctggtactggtttaactggtgccgaagccgttatg
gctcttggtgaagaataccacaaaaacgaatattaa
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integrated database retrieval system
