Enterococcus faecalis Symbioflor 1: EFS1_0531
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Entry
EFS1_0531 CDS
T02399
Name
(GenBank) 3'-5' exoribonuclease yhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efs03019
]
EFS1_0531
Messenger RNA biogenesis [BR:
efs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFS1_0531
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CCO71609
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All DBs
Position
536412..537356
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AA seq
314 aa
AA seq
DB search
MKKLRELTVEELFESFVLIKNADVRVAKNGKKFIAFTFQDTSGTIDGKYWDASEDEITRF
TAGNVVLLNGKREVYQNKPQVKILHMRLATAEEPSQPSLYMERAPLKKEEMVEEINQVIF
EITNAHWNRIVRYLMTKYQQEFYEFPAAKRNHHAFANGLAYHTVSMLRLGKAIAKEYPEI
NTSLLYAGIILHDLGKVLELSGAITTEYTVAGNLIGHLVLVDEEITKACLALKIDDREED
VVVLRHMVLAHHGLLEYGSPVRPRIMEAEILHQIDTMDASIQMMLGAIRQTQPGEYTERI
FGLDNRSFYVPKDK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaattacgtgaattaacagtagaagaactttttgaatcatttgttctaattaaa
aatgccgatgtacgtgtagctaaaaatgggaaaaagtttattgcctttacctttcaagac
acatctggcacgattgacggaaaatattgggacgcctctgaggatgaaattacacggttt
actgcgggaaacgttgttttactgaatgggaaacgagaagtttatcaaaataaaccccaa
gtaaaaattttacacatgcgtttagcgacagcagaggaaccaagccagccaagtttatat
atggaacgagcgcctttgaaaaaagaagagatggtcgaggaaatcaatcaagtgattttt
gagattaccaatgctcattggaatcgtattgtgcgctatctcatgacgaaataccaacaa
gaattttatgaatttcctgcagccaaacggaaccatcatgcttttgcgaatggcttagct
taccacactgtctcaatgttgcgcctaggcaaagcaattgctaaggaatatcctgaaatt
aacacgtcactattatacgcggggattattttacatgacttaggaaaagttttagagtta
tctggcgctattacgacagaatatacggtggcagggaacttaattggtcatttagttttg
gtggatgaggaaattaccaaggcgtgtttggctttgaaaattgatgatcgagaagaagac
gttgtcgttcttcggcacatggtcttagcccaccatggattgttggaatatggctcacct
gtgcgaccaagaattatggaagcggaaatcttacatcaaattgataccatggatgcgtcc
attcaaatgatgctaggggcaattcgtcaaacacagcctggggagtatacggaacgaatc
tttggtttagataaccgcagtttctatgttccaaaagataaataa
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