Enterococcus faecalis Symbioflor 1: EFS1_0940
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Entry
EFS1_0940 CDS
T02399
Name
(GenBank) exonuclease RexB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_0940
Enzymes [BR:
efs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFS1_0940
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EFS1_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CCO72018
LinkDB
All DBs
Position
966289..969879
Genome browser
AA seq
1196 aa
AA seq
DB search
MSVQFIRGTAVADLEAPLIQATKQWLEEDAQHEVFYLVPNHIKFEQEIQVLQKLRQLQTT
TSDSITSTRLQVFSFYRLAWYYLQHTPFYSADVLSDAGAAMIFRKILVEAEEELQIFRGE
INKPGFIQQLFQLYQEMREGNIEIAELYPFLEKQTENPKGQDLQLKFQDLTLIFTRFQLQ
MSQYGYESAEIIQHLSEYLQTVDLSNVQFVISGYQQFTARELKLIEVLMAQAGSVKVALL
LDKQYPHDLPDPRSLFYEAGQTYHQLYQLARQKQIPILSDYVEKKEVLITNPDLQGLNDY
WIQSQEHLPPLSAADWRGDGLFLWRAENVKEELTHVATEIRRLVVEEGYRYKEIQVLTRD
LDCYENLLEPIFAEHEIPVYVDRDMAMDRHPLVEWIESLFAIHSYNYRYRDVLRFLRTEL
FMPMNQLATSEESLTDWLNQRNAWRRKVDITENVVLAYGYEGYYWSQEKDWEFIRYDFEA
EEQEDVATMEEESNAIRQSLQRLLPSYFQAMISAKTGLEAATVFYHFLLQSGVATQLKMW
RLQAIEAGQLETARNHEQTWDALMSLLDEYVTVYGESSFDFTTFQEIFVSGLEGLHYSKV
PTAIDQVQVRAMDLTRPGAAKVTFAIGMTEEIFPQKIENKTLLSDEERQTINDTLTENQY
LRGTTGRKIAQEPYVAYLVFSSARERLYLTYPSVKDTAQEVKPSPYFKNIQKDLNLPVFE
KNETTIFDDETTSLAHISTYRTLIGELTRLKRQRKETQEGLLPFWLNMEKALMNQSIAPL
AKQVFESLTHQNIPEKIDEVLAEPLYGKDIYTSVSRMESFYRCQYQYFSRYGLRLKERDV
FGLSPAATGEFFHEALDQFFKLLIMNQRNLSELTDQEVNLLAEEVLNSILGDARFSVLTT
SSRMNYIRYQLSQTIKKVSWALKRQSQRSGMTTVQTEVLFGQIAAKKGISGLELPLKNQG
KIHVRGKIDRIDQLVTPESTYLGVIDYKSSHRKFNMTEAYYGLAMQMLTYLDVALMDAVQ
LVGQEAKPAGSLYLHVHNPTLSYEGKDDIEQQMLKKYQFDGLLMKDPDLLDHLDTSLQAK
QSSLLFPIEESAKEQIKPGRRQEDKFVTEPELGALLSHNRNKFIEAGNQIIGGEVQLNPA
YQGKERIACRYCPFRSVCDFDVMLKENNYHRIENLSKEEIMARLLNKDEEGATEDE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcagtttattagaggaaccgccgtggcagacttagaagcgccacttatacag
gcgacaaaacaatggctagaggaagacgcacagcatgaagtattctatttagtcccgaac
catattaagtttgagcaagaaattcaagtcttgcaaaagttacgtcaattacagacaact
acgtctgattcaataaccagtacccgtctgcaggtttttagtttttatcgtttggcttgg
tactatttacaacatacacctttttactcggcagatgttttatctgatgcaggtgctgcg
atgatttttcgcaaaattttagtagaagcagaagaagagttacaaatttttagaggtgaa
attaacaagcctggctttattcagcaactatttcagctttatcaagaaatgcgcgaaggc
aatattgagattgcggagctttatccatttttagaaaaacaaacggagaaccctaaagga
caagatttacaacttaagtttcaagatttaacgttaatttttacgcgattccaattgcaa
atgagtcagtatggctatgaatcagcggagattattcaacatttaagcgagtatttacaa
acggttgatttgtcgaatgttcaattcgttatttcaggctatcagcagtttactgccaga
gaattaaagttgattgaagtgctaatggcgcaagcaggttctgtgaaagtagccctttta
ttggacaaacaatatccgcatgacttacctgatccgcggtcgttattttatgaagcggga
caaacctatcatcagctttatcaactagcaagacagaagcaaatcccgattctttcagat
tatgtggaaaagaaagaggtattaattacaaatccagatttgcaaggattaaacgattat
tggattcaatcgcaagaacacctgcctccattaagcgcagctgactggaggggcgatggc
ttatttctgtggcgtgctgaaaacgttaaagaagaattaacacatgttgcaaccgaaatt
cgccgtttagtggtggaagaagggtatcggtacaaagaaattcaggtgttgactcgtgat
ttagattgttatgaaaatttattagaaccgatttttgcggaacacgagattcctgtttat
gtcgaccgagatatggctatggatcggcatcctttagtcgaatggattgaatctttattt
gctattcattcgtacaattatcgttatcgtgatgtgctccgttttttgagaacggaatta
tttatgccaatgaatcaactcgctacttctgaagaaagcttgactgattggttaaaccaa
cggaacgcttggcgcagaaaagttgatattaccgaaaatgtagtcctggcatacggctat
gaaggttattattggtcacaagaaaaagattgggaatttattcggtatgattttgaagcg
gaagagcaagaagatgtcgctacgatggaagaagagtcaaatgcgattcgtcaatcgctt
caacggctgctacctagttactttcaagcaatgataagtgccaaaactggtttggaagca
gcgaccgtcttctatcactttttactgcaaagtggtgtggcaacacaattaaaaatgtgg
cgcttacaagctatcgaagcaggtcaactagaaacagctcgtaaccatgaacagacttgg
gatgcattgatgtcgttactagatgaatacgtcactgtttacggagaaagttcgtttgat
tttacaacgtttcaagaaatatttgttagtggcttggaaggtttgcactatagtaaagtg
ccgacagcgattgaccaagtacaagttcgcgcaatggatttaactcgacctggcgctgcc
aaggttacttttgctattgggatgacggaagaaatttttccacaaaagattgaaaataaa
acactattgtctgatgaagaacgtcagacaatcaatgatactttaacggaaaaccaatat
ttacgtgggacaaccggacgcaaaattgcgcaagaaccttatgttgcgtatctcgtcttt
tcttcagcgcgagaacggttatatttaacctatccaagtgttaaagacaccgctcaagaa
gtcaaaccgtctccttattttaaaaatatccaaaaagatttaaacttgcccgtttttgaa
aaaaatgaaacaaccattttcgatgatgaaacgaccagtttagcccatattagtacgtat
cggacgttaatcggtgaattaacgcgtttgaaaagacaacggaaagaaacacaagaagga
ttgttgcctttctggttaaatatggaaaaagcgctaatgaaccaatcaattgcgccgcta
gccaagcaagttttcgaaagtttaacgcatcaaaatattcctgaaaagattgatgaggtc
ttagcagaacctttatatggtaaagatatttatacatccgtttctcggatggagagtttt
tatcggtgtcaatatcaatacttttctcgctatggcttacgtttgaaagaaagagatgtc
tttgggctttcgccagcagctacaggggaatttttccatgaagcattggatcagttcttt
aaattattgattatgaatcaacggaacttatctgaattaaccgatcaggaagtcaattta
ttggcggaggaagtactaaatagtattttaggggatgcacgtttttctgtattaacgacc
tctagtcgcatgaactatattcgctatcaattgagtcaaacaattaaaaaagtcagttgg
gcgctgaaacgccaaagccaacgaagtggcatgacgactgttcaaacggaagtgttattt
ggccaaattgccgctaaaaaaggaatttctggtttggaattaccattaaaaaatcaaggg
aaaattcatgttcggggaaaaatcgaccggattgatcaattggttacacccgaatcaacc
tatttaggtgtgattgattataaatcgagtcaccgtaaatttaatatgacagaagcgtat
tacggcttagccatgcaaatgctgacgtacttggatgtggctttaatggatgctgtgcaa
ttagttggtcaagaagctaaacctgctggctcactttatctgcatgtacacaatcctaca
ttatcttatgaaggcaaagacgacattgaacaacaaatgcttaaaaaatatcagtttgat
ggtcttttgatgaaagacccagatttattggatcatttagatacgagtctgcaagctaaa
caaagttcgttgctgtttccgattgaagaatccgccaaagaacaaattaaacctggtcgt
cgccaagaagataaatttgtgacagaaccagaactaggcgcgttgctttcccataaccga
aataaatttattgaagcggggaatcaaattattggcggcgaagttcaacttaatcccgct
tatcaaggcaaggaacggattgcttgtcgttattgtccgtttcgaagtgtctgtgatttt
gatgtgatgttaaaagaaaataattatcatcgtattgagaatttatccaaagaggaaatt
atggcgcgcttgttaaacaaagatgaggaaggagcaaccgaagatgagtaa
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