Enterococcus faecalis Symbioflor 1: EFS1_0941
Help
Entry
EFS1_0941 CDS
T02399
Name
(GenBank) ATP-dependent nuclease, subunit A, putative
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_0941
Enzymes [BR:
efs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFS1_0941
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EFS1_0941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_12
nSTAND_NTPase5
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CCO72019
LinkDB
All DBs
Position
969872..973666
Genome browser
AA seq
1264 aa
AA seq
DB search
MSKTIPLRPANEQFTDSQWQAVFDGDENILVSASAGSGKTTVLVRRVIEKVKSGVDIDRL
LIVTYTEAAAREMKERIQVALQKAMNEEQDPERRRHFSRQIALLPTANISTLHAFCLTVI
RRFYYLIDIDPVFRMLTDETETLLLKEDVWDALREQFYAENQEAFYQLTANFSNDRSDDG
LTNLIFSFYEFAKANPDPEAWINGLTQAYEVGDQLGESTLFQTYLKPLAVETLQRTLQRY
EEMVTLTEGEEKLQKIWYLAQNEKEQTKQFLQFLERNDLESAYNLTELLSFDRYPTVRAE
ELKPTAEQAKQLREQNKKALNDLKKQLFTLSPDAMKQVLKEATPIVQEMAHVGKQFMEAY
GAEKRLKNLVDFNDLEHYTLAILAKNQADGWHASEASVYYREKFDEVLVDEYQDINQLQE
SILYWLRRPLSTEGNLFMVGDVKQSIYSFRLADPTLFIEKYNQYGQGKEGKRIILAENFR
SRKDVLDFTNLVFSQLMDERVGQIAYDESAALVHGFDQFSEAADYSTELLIYEKKATESV
GFPELQSPELLIEDKTEGELYVTALKIRELIDQNFLIYDKKLKTDRPITYQDIVLLTPTK
KNNLTILDVFKSLEIPVQVNDAQNYFQATEIRTMIALLQLIDNPYQDIPLAAVLRSPIVG
LKENELVLIRLANKETSYYEAFLTFNQKMEPTMEEAVVQEKTIRFAESLEKWREQARRNQ
ISTLLWTIYRETAYLDYVGGLPVGKQRQANLYALVDRAAAYEKTTFRGLFQFVRFIEKMQ
EKDKDLAEPVVLSEENAVRVMTIHASKGLEFPVVFVLDMTKEFNVSDLNERYIFEENLGV
GIRYLQPEERVMYDTLPFLAIKQVRLRKLLSEEMRKLYVALTRAEQKLFLVGSYKDQAAM
WKEWLKVGDVETLVLPAENRLQSKSSLMNWVGMTLVRHQKADEYQQEVVVSNVPQVKKHP
ANFHIQWFNEEQLRAAIQQLQLPERQAEDLAEKAQLSADKINRGLARLSFNYPFEVATRT
TSYQSVSEIKRVFDDPDNKEIGKIEVREDNTIQAQPLIVNRMIEGDLSKPKFLDTVQAPS
AAEIGTATHYLLQLIDLSKQPSYEEVRAVQERLVENKLILPAIAEKMNLEQIVAFFDTAL
GKQLIQHHQTVRREQPFSMLIEAEELIQNYPETTQDDLLIHGIIDGYIELDNQCILYDYK
TDHVKSTSPQAISEIVERYRGQMNLYRRALQEATHKEVSHVYLILLNGGVIIDMQTGNVV
DFIK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaattccactacgtccagccaatgagcaattcaccgacagtcaatggcaa
gcggtgtttgatggcgatgaaaatatcttagtttctgcttcggctggctcaggaaaaacc
accgttttagtccgccgtgtcattgaaaaagtcaaaagcggcgtcgatatcgatcgtctc
ttgattgtgacgtacactgaagccgccgcccgtgagatgaaagaacgtatccaagtggct
ttacaaaaggcaatgaatgaagaacaagatccagaaagaagacggcatttttctcgtcaa
attgctcttttgccaacagccaatatcagcacgttacatgccttttgtttaactgttatt
cgtcgtttttattatttaattgacatagatccagtttttcggatgttaacagatgaaaca
gaaacattgttattaaaagaagatgtttgggatgcattacgtgaacaattttatgcggaa
aatcaagaagcgttttaccaattaacagcgaatttttccaatgaccgtagtgatgacgga
ctcactaacttaattttttctttttatgaatttgccaaagccaatcctgatccagaggcg
tggattaatggcttaacacaagcctacgaagtaggggatcagctaggcgaatcaacgtta
tttcagacgtatttaaaaccgctagccgttgagacgttacaacgaactcttcagcgttac
gaagaaatggtgaccttaacagagggcgaagagaaacttcaaaagatttggtatttagct
caaaatgaaaaggaacaaacaaaacaatttttacaatttttagagagaaatgatttagaa
agcgcctataatttgactgaattgttaagctttgaccgctacccaacggttcgtgccgaa
gagttgaaaccaaccgcggaacaagccaaacagttacgagaacaaaataaaaaagcgtta
aatgatttgaaaaagcaactgtttacactttctccagatgccatgaaacaagtcttgaaa
gaggccacgcccattgttcaagaaatggctcacgtggggaaacaatttatggaggcctat
ggcgcagaaaaacggcttaaaaatttagtggattttaacgatttagaacattatacgtta
gctattttagcgaaaaatcaggcagatggctggcatgcatcagaagcctcggtttactat
cgcgaaaaatttgatgaagtgttagtcgatgaataccaagatatcaatcaattacaagaa
tctattttgtattggttgcgccgtccgcttagcacagaaggaaacctttttatggtagga
gatgtgaaacagtctatttattctttccgcttggcagatcctacattgtttattgaaaaa
tacaatcagtatgggcaaggcaaagagggtaaacgaatcattctagctgaaaattttcgt
tcccgcaaagacgttttagactttacgaatttagtatttagtcaattaatggatgagcga
gtgggccaaattgcttacgatgagtcagctgctttggttcatggttttgatcaattttcg
gaggcggctgattattcaactgaattgctaatttatgaaaaaaaagcaacagaatcagtt
ggatttccagaattacaatcccctgagttgttgattgaagataagacagaaggggaactt
tacgttactgctttgaaaattcgtgaattaattgaccaaaatttcttaatttatgataaa
aagctgaaaacggatcgaccgattacttatcaagatattgtcttattaacgcctacaaag
aaaaataatttaactattttagatgtttttaaatcattagaaattccagttcaagtcaat
gatgctcaaaattatttccaagcaacggaaattcgtacaatgattgccttgcttcaattg
attgataatccctatcaagacattcctttggcagctgtgttacgttcaccaattgttgga
ttaaaagaaaacgaattagtgcttattcgtttggctaataaggaaaccagttactacgaa
gcatttttaacgtttaatcaaaagatggaaccaaccatggaggaagcagttgttcaggaa
aaaactatacgttttgctgaatcattagaaaaatggcgggaacaggctcgacgcaaccag
attagcaccttgctgtggacgatttatcgggaaacggcctaccttgattatgttggcggg
ttgcctgttggtaaacaacgccaagccaatttatatgcgttggttgatcgggccgcggcg
tatgaaaaaacaaccttccgcggattatttcaatttgttcgcttcatcgaaaaaatgcaa
gaaaaagacaaagatttagcagaaccagtcgttttaagtgaagagaatgccgtacgcgtc
atgacgattcacgctagtaaagggttagaatttccggtggtattcgttttagatatgacc
aaagaatttaatgtcagtgatttgaatgaacgctatatctttgaagaaaatttaggggta
ggcattcgttatttacaacctgaagaacgagttatgtacgatactttaccatttttggcg
attaaacaagtacgattaagaaaattactatccgaagaaatgcggaagttatatgtggcg
ttgacacgtgcagaacagaaactttttctggtgggctcctataaagaccaagcggcgatg
tggaaagagtggctgaaagttggcgatgtagaaacactggtgctaccagctgaaaatcgc
ttgcaaagtaaaagtagtttaatgaattgggttgggatgacattggtacgccatcaaaaa
gccgatgaatatcagcaagaagtagtagtaagtaacgttccgcaagtcaaaaagcaccca
gctaactttcatattcagtggttcaacgaagaacaactacgagcagccattcagcaatta
caattgccagaaagacaagcagaggatttagccgaaaaagcgcaattatctgctgacaaa
atcaatcgtggccttgcacggttaagtttcaattatccgtttgaagtggctactcggacc
accagttatcagtctgtttctgaaatcaagcgagtatttgatgaccccgataacaaagaa
attggtaaaattgaggttcgggaagacaatactattcaagcgcaaccgttgattgtcaat
cgaatgattgaaggagatttaagtaagcctaaatttttagatacggttcaagcgccctca
gcagctgaaattgggacagcaacccattatttattacaactaattgatttaagtaagcaa
ccttcttacgaggaagtgcgagctgttcaagaacgcttagtggaaaataaattgatttta
ccagcaattgctgaaaaaatgaatctggaacaaatcgtggccttctttgacaccgcctta
ggaaaacaattgattcaacaccatcaaaccgttagaagggaacaacctttttctatgctg
attgaagcagaagagctcattcaaaattatccagaaacgacacaagatgatttattaatt
catgggattattgatggctatatcgaattagacaatcaatgcattttgtatgactataaa
accgatcatgtaaaaagcacctctccccaagcgatttctgaaattgtcgaacggtatcgc
ggacagatgaatctttatcgtagagcactacaagaggcaacgcataaagaggtgtcgcac
gtctatttaattttattaaatggaggagtaattattgacatgcagacaggaaatgttgta
gattttataaagtag
DBGET
integrated database retrieval system
