Enterococcus faecalis Symbioflor 1: EFS1_1406
Help
Entry
EFS1_1406 CDS
T02399
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efs03032
]
EFS1_1406 (topA)
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_1406 (topA)
Enzymes [BR:
efs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EFS1_1406 (topA)
DNA replication proteins [BR:
efs03032
]
Prokaryotic type
DNA Topoisomerases
EFS1_1406 (topA)
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EFS1_1406 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CCO72484
LinkDB
All DBs
Position
complement(1457058..1459136)
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDIENNYEPHYISIRG
KGDVIKSLKAAAKKAEKVYLAADPDREGEAIAWHLAYLLGLDLKDKNRVVFNEITKEAVK
AAFKEPRTINVDLVDAQQARRILDRLVGYSISPILWRKVKKGLSAGRVQSVALKMIIDRE
NEIREFKPEEYWSIDGNFQKGRKKFKANFWGVDGKKKKLPNAEAVKEITSRIDGKDYDVT
KVEKKERKRNPALPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGIALGKQGTVGLITYM
RTDSTRIADSAKAEAAEFIEKTYGDEFSAHGGRKAKNTQGAQDAHEAVRPSSVLRTPDEM
KKYLDKDQLKLYTLIWSRFVASQMTPAILDTMKVTLQQNGVTFIANGSKVKFKGFMQVYV
EGRDDGKEDKENILPELVEGDVVKSVDIEPKQHFTQPPARFSEATLIRTLEENGVGRPST
YAPTLETIQRRYYVKLTNKRFEPTELGEIVNSLVSEFFPQIVDTHFTATMETDLDKVGEG
QEKWVEVVDRFYKPFEKELTNAEEKIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC
SNFPDCRNTKAIVKEIGVTCPVCHEGQVIERKSKKNRIFYGCSRYPECDFTSWDKPVGRP
CPKCGQYLVEKKVKGGKQVVCINGDYEENVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcctataagtatctcgtgattgtagaatcacctgccaaagccaaaacaattgaaaaa
tatctaggaagaaactacaaggtggttgccagtgttggtcacattcgcgatttaccaaaa
agtaaaatggggattgatattgaaaataattatgaacctcattatatttcgattcgcgga
aaaggcgatgtcatcaaaagtttaaaagcggctgcaaaaaaagctgaaaaagtctatctc
gcagccgatccggaccgagaaggtgaagcaattgcttggcatttagcttatcttcttggc
cttgatttaaaagataaaaaccgtgtggtattcaatgagatcactaaagaagcggtaaaa
gcggcatttaaagaacctagaaccatcaacgttgatttagttgatgcacaacaagcacgg
cgcattttagaccgtttagttggatactcgattagtcctattttatggcgtaaagtcaaa
aaaggtttgagtgctggtcgtgtgcaatctgttgctttaaaaatgattattgatcgagaa
aatgaaattcgagaatttaaacctgaagaatattggagcattgatgggaatttccaaaaa
ggtcgcaagaaattcaaagcaaatttctggggcgtagatggtaaaaagaaaaaattacca
aatgcagaagcggtgaaagaaatcacttctcgaattgacggtaaagattacgatgttaca
aaagttgagaaaaaagaacggaaacgtaatcctgcattaccttttacaaccagtagttta
caacaagaagcggcacgtaaattaaatttccgtacccgtaaaaccatgatggttgcgcaa
caattgtatgagggaattgctttagggaaacaaggcactgtggggctgattacctacatg
cgtacagactcaaccagaattgccgattccgccaaagcagaagctgctgaattcattgaa
aagacctacggagatgagttctcagcacatggcggccgcaaagcaaaaaatacgcaaggt
gcacaagatgcccatgaagcggttcgtccgtcaagcgttttaagaacacctgatgaaatg
aagaagtatttagataaagatcaattaaaattatatactcttatttggtcgcgctttgtt
gctagtcaaatgacaccagcgattttagataccatgaaggtcacgcttcaacaaaacggc
gtaacgtttattgccaatggctccaaagtgaaatttaaagggtttatgcaagtatatgtt
gaaggacgcgatgatggtaaagaagacaaggaaaatattttacctgaattagtggaaggt
gacgttgttaaatcggtcgatatcgaaccgaaacaacactttactcaaccaccggctcgt
tttagtgaagccacgttaatccggactttagaagaaaatggtgtgggccgaccatcaacg
tatgcgccaacattagaaaccattcaacggcgttattacgtgaagctaaccaataaacgg
tttgaaccaacggaattaggtgaaattgtgaattctctagtttcagagtttttcccacaa
attgtcgatacacattttacagcgacaatggaaacggacctagataaagtcggtgaaggc
caagaaaaatgggttgaagttgtcgatcgcttctacaagcccttcgaaaaagaattaaca
aatgccgaagaaaagattgaaaaaatccaaattaaagatgaaccagcaggttttgactgt
gaactatgtggacatccaatggtgattaaactgggtcgctacggaaaattttatgcatgt
agtaatttcccagattgtcggaatacaaaagcgatcgttaaagaaattggcgtgacgtgt
cctgtgtgtcacgaaggacaagttatcgaacgcaaatcaaagaaaaatcgaattttctat
ggctgtagtcggtacccagagtgtgacttcacttcttgggacaaaccagtaggccgacca
tgtccaaaatgtgggcaatatttagtagagaaaaaagttaaaggcggcaaacaagtcgtt
tgtatcaatggcgattatgaagaaaacgtccaaaaataa
DBGET
integrated database retrieval system
