Enterococcus faecalis Symbioflor 1: EFS1_1445
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Entry
EFS1_1445 CDS
T02399
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
efs
Enterococcus faecalis Symbioflor 1
Pathway
efs03410
Base excision repair
efs03430
Mismatch repair
efs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFS1_1445 (recJ)
03430 Mismatch repair
EFS1_1445 (recJ)
03440 Homologous recombination
EFS1_1445 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_1445 (recJ)
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EFS1_1445 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EFS1_1445 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EFS1_1445 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
CCO72523
LinkDB
All DBs
Position
complement(1493037..1495349)
Genome browser
AA seq
770 aa
AA seq
DB search
MKKSNYQWQLQTKTELPVEFIEQLKKEEINPLIGQLLWHRNIRTEEALRKFLHPTIEDIY
DPFLMHDMEKAVARIQQAVEAGEQILVYGDYDADGITSTTVMKEAIELVGGMVQYFLPNR
FVHGYGPNKDVFAEQIEQGVQLIVTVDNGVAGHEAISYAMAQGVDVIVTDHHELPEQLPE
AFAIVHPRHPQGDYPFGDLAGVGVAFKVATALLGELPIELLDLVAIGTIADLVSLTDENR
TFVKMGLQMIQTGDRIGLDVLLQEAGVKKEAVSEESIGFTIGPRLNALGRLGEAAPGVEL
MTTFDEEQALEIAKYIDQQNNERKDIVTTIAKEALDLIDPNAPVHILAKQGWHEGVLGIV
AGRIMQETGKPTIILAIDESGTTAKGSGRSISALNLYEALNEVREQFTHFGGHHMAAGMT
LPVENIPFVQEHLSHFIEKNQIDMANGQELLISESLAVSQATTTFIDQLRILAPFGTDNT
VPTFVFKEITPTQIRKIGADNAHLKFQMNQEGAQLDAIAFQMGPQADELAQGTADVAGQL
SINEWNGRKKPQLMVTDFAVSGRQLFDFRGKNNQTKPIPSEATAYLLFDEKNQKFISDPT
ANIIVWSNQEELVEAVSQNQIEQLVFVDCPVEAITVKEIVEATEIQRIYMMFISPEEAYL
NGMASREQFATLYKFILQQKEVNLRSQLSKVANYLNIQEKLLIFMIQVFFDLGFVTIESG
VLNSIEKPDNRPLTESQVYQQRLKKIKTEEFLLYSDCQTIQQWLWNEEDK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatcaaactatcaatggcagttacagacaaagacagaattacctgtagaattt
atagaacaattaaaaaaagaagaaattaatccattaattggccaacttttatggcaccgc
aatatccggacagaagaagcattacgtaagtttctacatccgactatcgaagatatttat
gatccgttcttaatgcatgatatggagaaagcggtagcccgcatccagcaagccgtcgaa
gcgggtgaacaaatccttgtctatggggattatgatgcagatggcatcactagtaccacg
gttatgaaagaagcaatcgaattagtcggtggcatggttcagtactttctaccgaatcgt
tttgttcatggatatgggcctaataaagacgtatttgctgaacaaattgaacaaggagtc
caattaattgtaaccgttgataatggtgtagccggacatgaagcaattagctacgctatg
gctcaaggggtagatgtaatcgttactgaccatcatgaattgcctgaacaattaccagaa
gcctttgcgattgtccaccctagacatccgcaaggtgactatccttttggagatttagct
ggtgttggtgtggctttcaaagtcgctactgcgttacttggtgaattgccaattgagtta
ttagatttggtagcaattgggacaattgctgacttggtttcattaaccgatgaaaataga
acgtttgtcaaaatgggccttcaaatgattcaaactggtgatcgaattggtttagacgtt
ttattacaagaagcgggtgtgaaaaaggaagctgtttcagaagaatcaattggctttacc
attggacctcgtttaaatgcgttaggtcgattaggggaagccgcaccaggtgttgaatta
atgactacatttgatgaagagcaagcgctggaaatcgctaaatatattgatcaacaaaac
aatgaacgaaaagatattgtaacgacgattgccaaagaagcgctggatttaatcgacccg
aatgcgccggtccatattttagcgaaacaaggctggcatgaaggcgtcttagggattgtc
gcgggccgcattatgcaagaaacggggaaaccaaccattattttagcaatagatgaatct
ggtacgaccgctaaaggctctggacgcagcattagcgcattgaatctctatgaggcgttg
aacgaagtgcgtgagcaattcactcattttggtgggcatcatatggcagcgggaatgact
ttacctgttgaaaatattccttttgttcaagaacatttgtcacactttattgaaaaaaat
caaattgatatggctaatggacaagagttgctcattagtgagagcttagcggtttcgcag
gcaacgactacttttattgatcaattgcgtattttggcgccttttgggactgataatact
gtgccaacttttgtatttaaggaaatcacgcctacgcaaattcgtaaaattggtgcagat
aatgcacatctgaaatttcaaatgaatcaagaaggggcgcaattggatgcaattgctttt
caaatggggcctcaagcggatgaactagcacaaggaaccgccgatgtggcaggccaactt
tccatcaatgaatggaatggtcgtaagaaaccacaattaatggtgactgattttgctgta
tcgggaagacaattatttgattttcgtggcaaaaataatcaaacgaaaccaattccttca
gaagcaacagcttatcttttgtttgatgaaaaaaatcaaaaattcatttcagatccaacc
gctaatattattgtttggtcaaaccaagaagaattggtggaagctgtttctcaaaatcaa
atcgaacaactggtttttgtcgactgtcctgtggaagcaatcacggttaaagaaattgtt
gaagcgactgagatacaacgtatatacatgatgtttatttcaccagaagaagcttattta
aacggtatggcttcacgtgaacaatttgcaacattgtataaatttattttgcagcaaaaa
gaagtaaatctacgttcccagctatcgaaggtggcaaattacttaaatatccaagaaaaa
ttattaattttcatgatacaggtgttttttgacttaggatttgttacaatagaaagcggt
gttttaaacagtattgagaaacccgacaatcgaccattgactgaaagtcaagtgtaccaa
caacgattgaaaaaaataaaaacagaagaatttctactttacagtgattgtcaaacaata
caacaatggctgtggaatgaggaggacaaataa
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integrated database retrieval system
