Enterococcus faecalis Symbioflor 1: EFS1_1489
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Entry
EFS1_1489 CDS
T02399
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
efs
Enterococcus faecalis Symbioflor 1
Pathway
efs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFS1_1489 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_1489 (nfo)
Enzymes [BR:
efs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EFS1_1489 (nfo)
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EFS1_1489 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CCO72567
LinkDB
All DBs
Position
complement(1539169..1540062)
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AA seq
297 aa
AA seq
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MLLGSHVSMSGKKMLLGSAEEAASYGSTTFMIYTGAPQNTRRKPIEEMNIEAGQAFMKEH
NLSNIVVHAPYIINLGNTIKTENFGFAVDFLRQEIERAQALGATQITLHPGAHVGAGPEA
GIKQIVKGLNEVLWKEQIPQIALETMAGKGTEIGRTFDELAAIIDGVTLNDKLSVTLDTC
HINDAGYNVKDDFDGVLVEFDKIIGLDRLKVIHVNDSKNPMGSHKDRHANIGFGTIGFEA
LNGVVHHEKLTALPKILETPYVGEDKKNKKAPYGFEIAMLKNQTFDPELLEKIQGQN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttattaggatcacacgttagtatgagtggcaagaaaatgctattaggctctgccgag
gaagcggctagttatggctcaacaacctttatgatttatacaggtgcgccacaaaacacg
cgccggaaaccgattgaagaaatgaatattgaagctgggcaagcgtttatgaaggaacac
aatttaagtaatatcgtcgttcatgccccgtatattattaatttaggcaatacaattaaa
acggaaaatttcggttttgccgtagactttttgcgacaagaaattgagcgagcacaagcg
ttgggagcaacgcaaatcacgttacacccaggtgcgcatgttggcgcaggtccagaagcc
ggcattaaacaaattgttaaaggtctaaacgaagtcttgtggaaagagcaaatccctcaa
atcgctttagaaacaatggctggtaaaggaaccgaaatcggccgtacgtttgacgaacta
gctgcgattattgacggagttacgctaaatgataagctttctgtcactctggatacttgc
cacattaatgatgcagggtataatgtaaaagatgattttgatggcgtattagttgaattt
gataaaattatcggattggatcgtttaaaagttattcatgtgaatgattctaaaaatcct
atgggctcacataaagatcgtcatgccaatattggctttggcactattggttttgaagct
ttaaacggtgtggttcaccatgaaaaattaactgctttaccaaaaattttagaaacacct
tatgtcggagaagacaaaaaaaataaaaaggccccttacggctttgaaattgcgatgtta
aaaaatcaaacatttgatccagaattattagaaaaaattcaaggacaaaactaa
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