Enterococcus faecalis Symbioflor 1: EFS1_2159
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Entry
EFS1_2159 CDS
T02399
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efs03400
]
EFS1_2159 (sbcC)
DNA repair and recombination proteins [BR:
efs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFS1_2159 (sbcC)
Archaeal homologous recombinant proteins
EFS1_2159 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
WSN
DUF3781
Shufflon_N
Motif
Other DBs
NCBI-ProteinID:
CCO73237
LinkDB
All DBs
Position
complement(2208120..2211257)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLSLTLKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKLR
LGKEMRSTFADPSEATEVTLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLIVKD
AQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLRNLF
GTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLESQQ
QEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETVIER
LKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMSELE
EQQPLIAEKQERLQTIQRQLPQYQEYEQLAQQQIAEQANYQAIQKEYESCQQEKTTLADK
VATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQGELHELTQRFA
VEQQQKSAEEAKLQTKKSQWASLQIQRLSLLLEEGESCPVCGSLEHPKQQTHQEVSLEEI
DQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADLQLPL
TGLTFSQVTPAEIAEVESQLAKEKQQIAQKLTEISVEKDRLAELEEQVAENSQRFEVLRQ
QVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQALLQEELSAFERQKENVTTQGET
LKKEEMILESTLTHLEKEQQTLQQTVAQLESQLKAVLTEQGVTEDQLTEWLKEVPTLESQ
QEQIALFEQEQTQLTIQLAEIEKKLSSDTFPELSLITTEIEQITQQIEEQEKKYYQLHEK
MLNNQQLVQEINAQRTTIEDKFEEVAALQQLADTVNGNNPKKISFERYMLQTYLERVLTV
ANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIYDDNSGTVRSAHTLSGGESFIAALAL
ALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEALEMAMEALETIENEGRMIGIISHIGEL
KARIPQQLQIKSNGNGQSTVHYQLA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattatctttaacattgaaaaacttcggaccgtatattaatgaaaccattgat
tttacgaagtttgaagattcttcactttttctaattagtggaaaaacagggtctgggaaa
acaacgatttttgatggaatgagctatgctttgtttggtgaaagttctgggaaattacgt
ttaggcaaagaaatgcgttccacatttgctgacccctcagaagccactgaagttactttg
ctttttaaacataacgagtatctctatgaactgaaccgccttcccgaacaagaacttttt
aaaaaacgtggcacaggagtccgtaaacaaagtgccaaaatttctttaattgtcaaagat
gctcaagggaaagaactacgagcctattctaaaagacgcgaagtggacgaactcattcaa
gaattattgcatttgaatgccaatcaatttgctcaaattgtattgttaccacaaggagag
tttcggacttttttaattgctaaaagtgatgaaaaagaaaaggttttgcgtaatttattc
ggaacagaattgtatcagttgttcagcgaaaatttaaaagaacgcttaaaaattgccaat
caagagattcaagaaacccagcaaaaaattgaactgaaaacagaacagttgcattggtca
gaagaacctgaaccgacaatgacactttttgaaaaacttcaattattagaaagccaacaa
caagaggctcagcaacaactattagttgaaagagaacaaattgcaaccttaaaacaagcc
aaacaagcaaaagagcaagttcgttatgctattgaagaacgacaaaacttgcaacagcaa
aaagaagaattactggaaaagaaagcaaaacaagctgaacaggaaaccgtcattgagcgg
ctaaaggaacagattcagcaattaaaatggagccaaaaacagcaatctttagctgaaaaa
gtctttgaaaaacgaagcgaaaaacaacaaaaagagcaagaaacaaagtccaaacaacaa
gctcttatggaaacgcaacaagcattgacagattggcaagcaatcatgagtgagttggaa
gaacaacaaccattgattgctgaaaaacaagaacgtcttcaaacgattcaacgtcaatta
ccacaataccaagaatatgaacagttagcccaacaacaaatagcagaacaagccaattat
caagccattcaaaaagagtatgaatcttgccaacaggaaaaaacaacattagcggataaa
gtggcgacagccaaacaatttattgaacaagaaggaacacttgaaaaagcaaattttgaa
tgttctagtgtagcagatcattggcaaaattttgtagaacgttggcaaaaaaatcaaaaa
gcttggcaaaaaattagtcaaaaccaaggggaattgcacgagctgacacaacggtttgct
gttgaacagcaacaaaaaagcgccgaagaagcgaagttgcagacaaagaaaagtcaatgg
gcctctttacaaatccaacgattaagcttgttacttgaagagggggaatcttgcccagtt
tgtggctctttagaacatccaaaacaacaaactcatcaagaagtttccttagaagagatt
gatcaagcggaacgggaattaacggaagttgaaaaaacggttcaacgatttactgaaacg
ctctctgcattaggggcggaaaagcaacagaaagaaagccaattacaagaacaggaagct
gcgtatactgaggaacaagaacaattagcagcgcagtttgctgacttgcagttgccgtta
acaggactaactttttcacaagtaacacctgcagaaattgcggaagttgagtcgcaatta
gctaaagaaaaacaacaaatagcacaaaaactaacggaaatttcagtcgaaaaggaccgt
ctggcggaactagaagaacaagtagctgaaaattctcaacgctttgaagtgctccgacaa
caagtagaaacaatgcaacaaagtctggaaagaatcactatccagcagcaaatgattgct
agccaattattggatgcaaccgtcacatacgaagaaatgaccaaacaacaagctttgctt
caagaagaactctctgcatttgaacgtcaaaaagaaaacgtgacgacacaaggagaaacc
ttgaagaaagaagaaatgatccttgaaagtacgttgacgcatttggagaaagaacaacaa
acacttcaacaaacagtcgcacaacttgagagtcagttaaaggcagttttaacggaacaa
ggcgtgacagaggaccaattgacggagtggttgaaagaggtaccgacactagaaagtcag
caagaacaaattgctttatttgaacaagagcaaacccaactgactatccaactcgctgaa
attgagaaaaaattatctagtgatacgttcccagaattatctttaatcaccacagaaatt
gaacaaataacacaacaaattgaagaacaagaaaaaaaatactatcaactgcatgaaaaa
atgctgaacaaccaacagttggttcaagaaattaatgcgcaaagaacaacaattgaagac
aagtttgaggaagttgctgcactacaacaattggcagatacggtgaatggcaataatcct
aaaaaaattagttttgaacggtatatgttacaaacgtatttagaaagagtgctgacagtc
gctaatcagcgtttagaccgcctgaccaatagtcgttatcaatttgaattgaatcacgaa
gcaggcagttatcggaatcaaacggggctagaaatcaatatttatgatgacaattcgggg
acggtgcgcagtgctcacacgttatcaggcggggaaagttttatagcagcgttagctttg
gcactttctttagcagaagtgattcaagaacaagccggcggagtcttaattgatgcgttg
tttattgatgaaggctttggttccttagatgaagaagcattggaaatggcaatggaggcg
ttagaaacgattgaaaatgaaggccgcatgattgggattattagtcatattggcgaatta
aaagcacgaattccacaacaattacaaataaaaagcaatgggaatggtcaaagtaccgtt
cactatcagctagcttag
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