Enterococcus faecalis Symbioflor 1: EFS1_2528
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Entry
EFS1_2528 CDS
T02399
Symbol
rncS
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
efs
Enterococcus faecalis Symbioflor 1
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EFS1_2528 (rncS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efs03019
]
EFS1_2528 (rncS)
03009 Ribosome biogenesis [BR:
efs03009
]
EFS1_2528 (rncS)
03036 Chromosome and associated proteins [BR:
efs03036
]
EFS1_2528 (rncS)
Enzymes [BR:
efs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EFS1_2528 (rncS)
Messenger RNA biogenesis [BR:
efs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFS1_2528 (rncS)
Ribosome biogenesis [BR:
efs03009
]
Eukaryotic type
90S particles
RNase
EFS1_2528 (rncS)
Prokaryotic type
rRNA processing factors
EFS1_2528 (rncS)
Chromosome and associated proteins [BR:
efs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EFS1_2528 (rncS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
CCO73606
LinkDB
All DBs
Position
complement(2577986..2578678)
Genome browser
AA seq
230 aa
AA seq
DB search
MDNQLTTELKERYGIVFHDVNLLEQAFTHSSYVNEHRYLKLSDNERLEFLGDAVLELIVS
QYLYLKFPELPEGKLTKMRAAIVREDSLAKFAKECHFDNYILLGKGEEASGGRTRASLLC
DLFEAFLGALYLDQKVGAAKKFIEDVIFPKIDAGAFSHEMDHKTQLQEVLQRKGDVSIEY
RLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERALKSIPQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcagttaacaacagagttaaaagaacgttacggcattgttttccatgatgtc
aatctattagagcaagcttttactcattcatcctatgtgaatgagcatcgctatttaaaa
ttatccgataatgaacgtcttgaatttttaggagatgcagttttagaattaattgtttca
caatatttgtatttaaaattcccagaacttccagaaggaaaattaacgaagatgcgcgca
gccatcgttcgggaagatagtttagccaaatttgcgaaagaatgtcacttcgacaactac
attttattaggtaaaggagaagaagcatcgggcggacgaacacgtgcatcattattatgt
gacttatttgaagcctttttaggtgccctctacttagaccaaaaagttggcgcagccaag
aaatttattgaagacgttatttttccgaaaattgatgccggtgctttttcacatgagatg
gatcacaaaacacaattacaagaagttttacaacgcaaaggcgatgtttcaattgaatat
cgcttaattaaagaagaaggccctgctcatgaccgcacctttttcactgaagtttacatg
aatggtgaactcattgggttaggccaaggaaaatcgaagaagttagctgaacaggatgcc
gctgagcgggcactgaaaagtattcctcagtaa
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