Enterococcus faecalis Symbioflor 1: EFS1_2594
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Entry
EFS1_2594 CDS
T02399
Name
(GenBank) 2,3-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
efs
Enterococcus faecalis Symbioflor 1
Pathway
efs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFS1_2594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efs03019
]
EFS1_2594
Messenger RNA biogenesis [BR:
efs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFS1_2594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
CCO73672
LinkDB
All DBs
Position
complement(2647421..2648977)
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AA seq
518 aa
AA seq
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MVLNILLAIVGLIVGLGLGFVIAKSRHDKAINGAKISASSILENARKESETLKKEALLEA
KEENQKYRSEIESELKESRLELKSQENRLIQREQTLDRKDDSLEKREGSLEEKEEKLGAR
QQLIDEREKEVENLINQQHQELERIASLSKEEAKSIIMKSTEEELNHELTLMVKESEQRA
KEESDRKAKNLLSLAIQRCAADSVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREY
GEQAAFEVGAHTLHPDLIKILGRLRFRTSYGQNVLNHSIEVAKLAGVLAAELGEDVQLAK
RAGLLHDIGKALDHEIEGSHVEIGAELAAKYKENSVVINAIASHHGDVEATSVISVLVAA
ADALSAARPGARSESLENYIRRLENLENISNSFEGVDSSFAVQAGREVRVMVKPEEISDL
ESVRLVRDIRKKIEDDLDYPGHIKVTVIRETRAVDYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggttttaaatattctcctcgctatcgtcggtttgattgtcggtcttggtttaggattt
gttattgcaaagtcacgtcatgataaagcaataaatggtgcaaaaatttcagcgtcgagt
attctcgagaacgctcggaaagaatcagaaacactgaaaaaagaagcattgctagaagct
aaggaagagaaccagaagtatcgttcagaaattgaaagtgagttgaaagaaagcagatta
gaacttaaatctcaagaaaatcgtttaattcaacgggaacaaacgttggatcgtaaagat
gactctcttgaaaaacgtgaaggctcactggaagaaaaagaagagaaacttggtgctaga
cagcaattaattgatgagcgagaaaaagaagtagaaaacttaattaatcagcaacatcaa
gaattagaacgaattgcttccctttcaaaagaagaagcaaaatcgattattatgaagtca
acagaagaagagttgaatcatgaactaaccttgatggtcaaggagtcagaacaacgtgcc
aaagaagaatctgatcgcaaagcgaagaacttgctttccctagcaattcaacgttgcgcc
gccgattctgtttctgaaacaactgtttccgtggtcactttaccaaatgatgagatgaaa
ggtcgcattattggtcgtgaaggacgtaatattcgtacattggaaacattaacagggatt
gacttaatcattgatgatacgccagaagcggttgtgttatccggatttgatccaatcaga
cgagaaatcgctcgaatgaccttggaaaaattaatccaagatggtcggattcatcccgct
cgtatcgaagaaatggtagaaaaatcacgtaaagaaatggatgaacggattcgtgaatac
ggagaacaagcagcctttgaagtaggtgctcatacgttacatcctgatttaattaaaatt
ttaggccgtttacgtttcagaacaagttatggtcaaaatgtcttgaaccactcaatcgaa
gtagcaaaactggctggcgttttagccgccgaattaggcgaagatgttcaattagccaaa
cgtgcaggtttactacatgatattgggaaagcattggatcatgaaattgaaggttctcac
gttgagattggcgcagaattagctgcgaaatataaagaaaattcagtagttattaatgcc
attgcctcgcatcatggtgatgtggaagcaacctcagttatttctgttttagtggcagcc
gcagatgcgttatctgcagcccgtccaggtgcacgtagtgaatcgttagaaaactacatt
cgccgcttagaaaacttagaaaatatttctaatagttttgaaggcgtggattcaagtttt
gctgttcaagcaggacgtgaagttcgtgtcatggtgaaaccagaagaaatttctgattta
gaatctgttcgtttagttcgagacattcggaagaaaattgaagatgacttggattatcca
ggacatatcaaagtaacggttatccgtgaaacacgtgccgttgactatgcgaaataa
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