Enterococcus faecium T110: M395_01010
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Entry
M395_01010 CDS
T03257
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eft
Enterococcus faecium T110
Pathway
eft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M395_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eft03019
]
M395_01010
03009 Ribosome biogenesis [BR:
eft03009
]
M395_01010
Enzymes [BR:
eft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M395_01010
Messenger RNA biogenesis [BR:
eft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M395_01010
Ribosome biogenesis [BR:
eft03009
]
Prokaryotic type
rRNA helicases
M395_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AII38393
LinkDB
All DBs
Position
195978..197489
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQRQTLLF
SATMPPAIKNIGVKFMKSPHHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKK
RMTTLRPPTEKEAFKGQLGAAVEQIETKLEENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPADAVPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDGGNYRGNKSKGGYSKNNN
SQKDGGKRHNDKKRGFVIRSNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactagaattatcaccagaattgttgaaatcagtcgaacgcgctggt
tttgaagaagcaacacctatccaagcagaaacaattccgctagcattagctggaaaagac
gttattggacaagcacagacaggtacagggaaaacagctgcatttggattaccaatgtta
gaaaaaatcgatccagatcgtcacgaattacaaggtctggttatcgcaccaacacgtgaa
ttagctatccaaacacaagaagagctatatcgtttagggcgcgacaaaaaagtgcgtgtg
caagccgtctacggtggagcagatattggccgtcagatccgtggtttgaaagatcgtcca
catatcgttgtgggtacaccaggacgtatgcttgaccacatcaaccgccacacgttgaaa
cttggaactgttcaaacattagtcttggatgaagcagatgaaatgttgaatatgggcttc
ttggaagatatcgaaaaaattatttcccaagttcctgatcaaagacaaacattacttttc
tcagcaacaatgccgccagccatcaagaacatcggcgttaaattcatgaaaagtccacat
catgtgaagatcaaagcaaaagaaatgacagctgacttgatcgatcaatactatgtccgc
gcaaaagaatacgaaaaattcgatatcatgactcgcttgtttgatgttcaaacaccagaa
ctaacaatcgtcttcggacgtacaaaacgccgtgtagacgaattggcacgcggattagaa
gcacgtggttatcgtgcagaaggaatccatggcgatttgtctcaacaaaaacggatgagc
gtattgcgttcattcaagagcggtcacttagatatccttgtagcgacagacgttgccgca
cgtggattagatatctcaggtgtcactcatgtgtacaactatgatatccctcaagatcca
gaaagctacgttcaccgtatcggacgtacaggccgtgcaggaaaaggcggtatgtctgtg
actttcgttacaccaaatgaaatggactacttgcatgtgatcgaaaacttgacgaaaaaa
cggatgacgactttacgtccgccaaccgaaaaagaagcattcaaaggtcaattaggtgct
gcagttgaacaaatcgaaacaaaacttgaagaaaacggtctagataaatacctgcaaaca
gcagataaattattagaagaatattctgcacaagatttggttgcattactgctgaaaacg
acagcaaaagatccagctgatgcagtaccagtgaagatcacaccagaacgtccattgcca
atgcagaaaaaaggatacaacaaaaatggcaaacgtggcggcggaaacaaccgtaatcgt
cgtgatggcgggaattatcgtggaaacaaatcaaaaggcggttatagcaaaaacaataac
agccaaaaagatggcggtaaacgtcacaatgataaaaaacgcggatttgtgatccgttca
aataacgattaa
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