KEGG   Enterococcus faecium T110: M395_05765
Entry
M395_05765        CDS       T03257                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
eft  Enterococcus faecium T110
Pathway
eft03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eft00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    M395_05765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eft03400]
    M395_05765
DNA repair and recombination proteins [BR:eft03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M395_05765
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      M395_05765
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD Kinesin AAA_30 AAA_25 AAA_7 AAA_19 AAA_5 AAA_22 TrwB_AAD_bind AAA_16 Microtub_bd SHCBP_N DUF87 AAA
Other DBs
NCBI-ProteinID: AII39011
LinkDB
Position
1157393..1159387
AA seq 664 aa
MIERDTSRRFELVSKYQPAGDQPEAINQLVDGVVGGKKAQILLGATGTGKTYTISNLIEK
VNKPTLIIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSSLLERNDVIVIASVSCIFGLGSPFEYQKQVVSIRQGAELDRNQLIRD
LVSIQFERNDIDFQRGRFRVRGDVVEIFPASRDERALRVEFFGDEVERIREVNALTGEVL
GETEHVAIFPATHFVTNDEHMEHAVANIKAELEQRLAVLRNENKLLEAQRLEQRTNYDIE
MMLEMGYTSGIENYSRHMDGRKEGEPPYTLLDFFPEDFLIVADESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEKHVNQIIYVSATPGPYEYEQTDTVIQQIIRPT
GLLDPVIEVRPIMGQIDDLVGEINERVEKDQRVFVTTLTKKMAEDLTDYFKELGIKVKYL
HSDIKTLERTEIIRDLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLV
QTIGRAARNEEGKVIMYADKVTDSMRLAMGETSRRRTIQQKYNEEHGIVPKTIIKEIRDL
ISITKESEDDTKEAVQVSYEEMTKEEKDTLLMKLEKEMKDAAKALDFETAANVRDMILEL
KASK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgattgagagagatacctcccgacgctttgagcttgtctcgaaataccaaccggctggt
gatcagcctgaagcgattaatcaattagtggatggcgtagtcggcgggaaaaaagcacaa
attttattaggtgcgactggaacagggaaaacatatacgatttccaatcttattgagaaa
gtgaataaaccaacactgattattgcccataacaaaacattggctggtcagctgtacggg
gaattcaaggaatttttccctaacaatgctgttgaatattttgtttcttattatgattat
tatcagcctgaagcttatgtgccttcaagcgatacgtatatcgaaaaagattcaagtgta
aatgatgagatcgataaattacgacattcggctactagttcattattagaaagaaatgat
gtgatcgtcattgcatctgtttcatgtatttttggattaggctcgccttttgagtatcaa
aaacaagtcgtttcgattcgacaaggagcagaattagatcgcaaccagttgattcgtgac
ttagtcagtatccagttcgaaagaaatgatatagattttcagcgcggtcgttttcgagtg
cgtggtgatgtcgtggagattttcccggcttcaagagatgaacgtgccttacgagtggag
ttttttggagatgaagtcgaacgtatccgagaagtcaatgcgctgacaggtgaagtttta
ggagaaacggaacatgtagcaatcttcccggcaactcactttgtgacgaatgacgaacat
atggagcatgccgtagcgaatatcaaagcagaattagagcagcgtttagctgttttacga
aatgaaaacaaacttctagaggctcaacgtttagaacagcgaaccaattatgatattgaa
atgatgttagaaatgggctacacttcaggaatcgaaaattattctcggcatatggacgga
cgtaaagaaggcgaaccgccttatacgctattggatttctttcctgaagattttttaatc
gtggctgacgaatcgcacgtgaccatgcctcaaatcagaggaatgtataatggcgaccga
gcgagaaaacagatgctagtagattacggtttccgcttgccatctgctttagataatcgg
ccgcttcgtctagaagaatttgaaaaacatgtcaatcagatcatttatgtctctgcgaca
ccaggaccatatgaatatgaacaaacagataccgttatccaacaaatcatccgtccgaca
gggctgcttgatccagtaatcgaagtccgtccaatcatgggacaaatcgatgatctagta
ggtgaaataaatgaacgggtcgaaaaagatcaaagggtgtttgtaacgacattgacgaaa
aaaatggcagaagacctcacagattatttcaaagaattaggaatcaaagtcaaatatctg
catagtgatatcaaaacgttggaacgaacagagatcattcgagatctacgattaggcgaa
tttgatgtgttagtcggaatcaatttgcttcgtgagggattagatgtacctgaagtttcc
cttgttgctatcttggatgcagataaagaaggctttttacgtagcgaacgttccttagtc
caaacgattgggcgagctgctcgtaatgaagaagggaaagtaatcatgtacgcagacaag
gtgacggattctatgcgtttagcgatgggtgaaacgtcaagacgtcgtacgattcagcag
aagtacaatgaagaacatgggatcgttccaaaaacgatcattaaagaaatccgagatttg
atttctattacgaaagaatcggaagatgatacaaaagaagcggtacaagtctcgtacgaa
gaaatgacgaaggaagaaaaagacacgttattgatgaaattagaaaaagaaatgaaagat
gcggcaaaagctttggattttgaaacagccgctaatgtgcgagatatgattttagaatta
aaagcttcgaagtag

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