Enterococcus faecium T110: M395_06660
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Entry
M395_06660 CDS
T03257
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eft
Enterococcus faecium T110
Pathway
eft03030
DNA replication
eft03430
Mismatch repair
eft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M395_06660
03430 Mismatch repair
M395_06660
03440 Homologous recombination
M395_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eft03032
]
M395_06660
03400 DNA repair and recombination proteins [BR:
eft03400
]
M395_06660
Enzymes [BR:
eft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M395_06660
DNA replication proteins [BR:
eft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M395_06660
DNA repair and recombination proteins [BR:
eft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M395_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
HROB
HEPN_RES_NTD1
Motif
Other DBs
NCBI-ProteinID:
AII39158
LinkDB
All DBs
Position
1360068..1363379
Genome browser
AA seq
1103 aa
AA seq
DB search
MFFPQLYTITSYSLLQSTIRIREYVQEAKKQGYTSLAITDKDVLYGAPEFYRICVEEGIQ
PIIGLHLSYTYEEKNYGLLAYAKDETGYQQLMKLSSRKMIQEKMALDDMIETDHLVFVVP
ANHSVSEAFNKEEHFFSHWQFLLENVFTKDFYIGLSENTPDQLPEWYQYVTKENYPLCAL
HPIASLQQEDLFALEVMKHIKEGSQMPLESLSAPLPPANGYLLSEQEMIKRFEEAGLSQA
VIGAQRLAESISFEFQFHQKLLPHYPVPQGKQAGEYLRELCYSQVEHRIVDYTKEYRERL
DYELSVIHQMGFDDYFLIVWDVMAFAHRNKIVTGAGRGSAAGSLVAYVLEITDVDPLEYD
LLFERFLNPERFTMPDIDLDIPDNRREEVLNYVREKYGQYHMAQIATFGTMAAKMVLRDA
ARVFGLSQSEANRWSKAIPNQLKITLTQAYKTSRQLVELVQASEKNQLLFKTAVILEGLP
RHVSTHAAGVVISDRNLLELVPLQRGSDEAFLTQYTMNEVEAIGLLKMDFLGLRNLSIID
FTLKAVKRVEGQEIRLKEIPLNDAKTLLLFQRGETSGVFQFESAGIRNVLRRLGPENIED
IAAVNALYRPGPMQNIDTFIARKKGKEAIRYPDDSLIPILKNTYGVIVYQEQIMQIASTM
AGFTLGQSDILRRAVSKKKKDVLDEEKSHFVSGALQQGYSEKTAVTVYEYIEKFANYGFN
RSHAFAYSFVGFQMAYLKAHHPGAFFTSLMNSVRHNTTKLKEYIAEARKNKLKLSSPSIN
QSNYSFELVNKEEIRFGLTAIKGIRRDFVEDVLNERKQNGPFKSVDQFLIRIDKRWLKLE
LLQSLTAVGVFDELSPNRKQLMLDLEGKIQNIVYSGGSLDLLGIMALKEEEVADYTLEER
LKLEEEYLGVYLSGHPAEGFDRLRLAKQVQLITDIVPNQPVNLLLMIKEVREIRTKKGEL
MAFVEGTDSSGEISVTVFPTLYRKYRNLFAVDQVIFVQGRSEISKYNQELQLIGESFADP
RQLETQYPSQTCYLRITEEREDPEIMKQLQGIFQKHPGYIPVIMYHEKTQRKVVLSDAYW
VDDSKSIKGQLVSLLGEDNVVFK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcccacaactttatacaattacttcttattctcttttacaaagtacgatccgt
attcgagaatatgtacaagaagcaaaaaaacaaggctacacttcattagccataacggat
aaagatgtcttatacggtgcacctgaattttatcgtatttgtgtagaagaaggaatacag
ccaatcattggattacatcttagttatacttatgaagaaaaaaattatggtttgcttgcg
tacgcaaaagatgagacaggttatcagcagctgatgaaactttccagtcgaaaaatgatc
caagaaaaaatggcacttgatgatatgatagaaaccgaccatctagtgtttgtcgttccg
gcaaatcattctgtttctgaggctttcaataaagaggaacattttttcagtcattggcag
tttttgcttgaaaatgtttttactaaagatttttatatcggattgtcagaaaacacgcct
gatcaattgcctgaatggtatcagtatgtgacaaaagaaaattatccgctttgtgcattg
catccaatcgctagtttacagcaagaagacctttttgcgcttgaagtgatgaagcatatc
aaagagggaagtcagatgcctttagaaagcttatctgcacctttaccaccagcaaatggt
tacctgctttcagaacaagaaatgatcaaacgattcgaagaagcaggtctttcacaagct
gtaataggtgctcagcgcttggccgaatcgatttcatttgaatttcagtttcatcagaaa
ttactcccgcattatcccgtccctcaaggaaaacaagctggagaatatttaagagagcta
tgctactcgcaagtggaacatcggatcgttgattatacaaaggagtaccgagaacgtttg
gactatgagttatctgtcatccatcaaatgggattcgatgattatttcctgatcgtatgg
gatgtaatggcttttgctcatagaaataaaatcgttaccggtgcaggccgtggttctgct
gctggttcattagtagcctatgtgttagaaatcacagatgtggatccattagagtatgac
ttgctattcgaacgatttttaaatcctgaacgttttacgatgccggatattgatttggat
attcctgacaaccgacgtgaggaagtattgaattatgttcgagaaaagtatggacaatat
cacatggcgcaaatcgcgacatttggtacaatggctgcaaaaatggttcttagagatgcg
gctagagtgtttggtctgtcacaaagtgaagcaaaccgctggtcaaaagcaataccaaac
cagctgaaaatcacattgacccaagcctacaaaacatcgcgtcaactagtagaattagtt
caggcaagcgaaaaaaaccaacttttattcaaaaccgcagtgattttagaaggattgcca
agacacgtttcgactcacgcagcaggggtagttatcagcgatagaaatctacttgaatta
gtaccgctccaacgcggttctgatgaagcttttctgacccaatatacgatgaatgaggta
gaagccatcggtcttttgaaaatggactttctaggactacgcaatttatcgattattgat
tttactttaaaggctgttaagcgagtagaagggcaggaaatccgattaaaagagattcca
ttaaatgatgcaaaaacgctactcttgtttcaacgaggcgaaacttcaggagtatttcaa
tttgaatctgctggtattcgaaacgttttacgaagattaggaccagaaaacatcgaagat
attgccgcagtcaatgcgttgtatcgtccaggtcctatgcaaaatatcgacaccttcatt
gccagaaaaaaaggaaaagaagccattcgctaccccgatgattcactgatcccgattttg
aaaaacacatacggggtgattgtctatcaggaacaaatcatgcagatcgcctcgactatg
gctggatttacattaggacagtcagatattttgaggcgggcagttagtaaaaagaaaaaa
gacgtattagatgaagaaaagtcgcattttgtatcaggagcattacaacaaggatattcg
gaaaaaacagcagtgactgtatatgaatatattgaaaaatttgcaaactatggattcaat
cggtcgcatgcatttgcttattccttcgtgggattccaaatggcatatctaaaggctcat
catccaggggctttcttcactagtctaatgaattctgttcggcataacacaacgaaattg
aaagaatatattgcagaagcacgtaaaaataaactcaaactttcttcaccatccatcaat
caaagcaattatagttttgagttggtcaataaggaagaaatcagattcgggctgacagcg
ataaaaggcatccgacgtgattttgtagaagatgtattgaatgaaagaaaacaaaatggc
ccgttcaagtcagtagatcaattcctcatacggatcgataagcggtggctgaaattagag
ttactgcaatcactgacagcagtaggcgtttttgatgaattatctcctaacaggaaacaa
ttgatgcttgatctcgaagggaaaatccaaaatatcgtttacagtggtggcagtctagat
ttgctaggaatcatggcattaaaagaagaagaagttgctgactatacactagaagaacga
ctgaagctggaagaggaatacttaggtgtttatttgtcagggcatcctgcagaagggttt
gaccggcttcgtttagctaaacaggttcagctgattacagatatcgttcctaatcaacca
gtcaatttactattgatgataaaggaagttagagagattcggacaaaaaaaggcgaactg
atggccttcgtggaaggaaccgatagtagcggagaaatttctgtcacggtttttccaact
ctttatcgaaaatatcgtaacctgtttgcagttgatcaagtgatctttgttcaagggcgt
agcgaaatcagcaaatataaccaggaactacaattgattggagaaagctttgctgatcct
cgtcagttagaaacacagtatccttcacaaacgtgctatttgcgtattacagaagaacgg
gaagaccctgagataatgaaacaattacaagggatttttcagaaacacccaggatatatt
ccagtaattatgtaccacgaaaaaacacaacgaaaagttgttctgtcagatgcttattgg
gtggatgacagcaagagtataaaggggcaacttgtttctctacttggcgaagataatgtg
gttttcaaataa
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