Enterococcus faecium T110: M395_07645
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Entry
M395_07645 CDS
T03257
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eft
Enterococcus faecium T110
Pathway
eft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M395_07645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eft03019
]
M395_07645
03400 DNA repair and recombination proteins [BR:
eft03400
]
M395_07645
Enzymes [BR:
eft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M395_07645
Messenger RNA biogenesis [BR:
eft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M395_07645
DNA repair and recombination proteins [BR:
eft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M395_07645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF4718
Motif
Other DBs
NCBI-ProteinID:
AII39308
LinkDB
All DBs
Position
1561818..1563641
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AA seq
607 aa
AA seq
DB search
MSFGENRSKMARERSGKMNDLLKQYFGYNEFRPGQKEIIQKVIDQENVLGIMSTGSGKSI
CYQLPSLLLDGLTVVVSPLISLMKDQVDAANQLGIPATFINSSLDGYETARRFQEIDRQQ
YRLLYIAPERFIMPDFIQAMNRWNVCMIAIDEAHCISQWGHDFRPSYLQMANQLDQLANR
PVIVALTATATIQVAADIKRLLKIPDGNHIQTGFERENLRFQVVKDQKKEQYLVEYLKIN
KNQSGIIYAATRKEVDRIYHLLKKFGFSIGRYHGGLNENERTAMQEAFLYDRLQLIVATN
AFGMGINKSNVRFVIHYQIPGSLEAYYQEAGRAGRDGLSSEAILLFAPQDIQVQKFFIQQ
SQREEEQKQKEYEKLKAMTEYAYIESCLQQYILNYFGETSSPCNRCGNCLDDREIVEVTT
QAQMVLSCLKRMGENYGKQMLMKVLAGSKEQKLRALGFERLSTYGLMKNQSQKETMQLIE
YLISNGYLLTVNGEYPILKVTERGIQVLKGQEAVYRKEPKKVQQLSDEETDTLFEVLREL
RTDLASEAGVPPYVVFSDSTLKEMSRIRPSSRLEMLQIKGVGQSKLDKYGEAFLSRIKNM
DPNVLDK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgtccttcggtgaaaaccgaagtaaaatggcaagggaaaggagcgggaagatgaacgac
ttattaaaacaatactttggttataatgagtttagacctggtcaaaaagaaattatccag
aaagtcattgatcaggaaaatgtattagggatcatgtctaccggaagtgggaaatcaatc
tgttaccagcttccatccttactattagatgggcttactgtggttgtatcccctttgatc
tctctgatgaaggatcaggtggatgcagcgaatcaattaggtatacccgccacttttatc
aatagctcgttagatggttacgaaacagctaggcgcttccaagaaatcgataggcagcag
tatcgtttactttatattgctccagaacgttttatcatgccggatttcattcaagcgatg
aatcgatggaacgtctgtatgattgccattgacgaggcgcattgtatctctcagtggggg
catgatttccgtccaagttatttacaaatggcgaaccagctagatcaactggcaaatcga
cctgtcattgttgctctgacggctacagcaactatacaagtagctgctgacataaaaaga
cttttaaaaatccctgacggcaatcacatccagactggttttgaacgggaaaatctccgc
tttcaagtagtgaaagaccaaaaaaaagaacagtatctagtcgagtatttgaaaatcaac
aaaaatcaatcgggtattatttatgcagcgacgagaaaagaagtagaccgaatctatcat
ttgcttaaaaaatttggattttctataggcagatatcatggtggcctaaatgagaatgaa
cgaacggcaatgcaagaggcctttttatacgatcgcttacagctaatcgtagcgaccaat
gcattcggcatgggcataaataaaagcaatgtccgttttgttatccattatcaaattcct
ggctctctagaagcatactatcaggaagctggtcgtgcgggaagagatggtctttccagt
gaagccattctgcttttcgctcctcaagatattcaggtccaaaagttttttatccaacag
tctcaaagagaagaggagcaaaagcaaaaagaatatgaaaaattaaaagcgatgacagaa
tacgcgtatatagaatcctgtcttcagcaatacatcctaaactattttggcgagacaagc
agtccgtgcaatcgttgtggtaactgtttagatgacagagaaatagtagaagtaacgaca
caagcacagatggtcctttcttgtttgaaacgtatgggggagaattacggcaagcagatg
ctaatgaaagtcttagcaggatcgaaagaacaaaagctgcgagccttagggtttgaacgt
ttatctacctatggactgatgaaaaaccaatcgcaaaaagaaacgatgcaattgattgaa
tatttgatatcgaatggctatcttctgaccgttaatggagaatatcccatcttgaaagta
acagaaagagggatccaagtattaaaaggacaagaagctgtttatcgaaaggaacccaag
aaagtccagcagctgtcggatgaagagaccgatacactatttgaagtgttgcgggaactt
cgaacggatctagcatcagaagcaggcgttcccccgtatgttgtattttcagattccacc
ttgaaagaaatgagccgaatacgtccatcaagcagactggagatgcttcagataaaggga
gttggtcaaagcaagcttgataaatacggagaagcctttttatctcggataaaaaatatg
gatcctaacgttctggataagtaa
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