Enterococcus faecium T110: M395_10210
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Entry
M395_10210 CDS
T03257
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
eft
Enterococcus faecium T110
Pathway
eft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M395_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eft03019
]
M395_10210
Messenger RNA biogenesis [BR:
eft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M395_10210
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AII39687
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Position
2055492..2057171
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AA seq
559 aa
AA seq
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MKLSIKNNETGVFAIGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY
IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLREAEL
HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVGEPANLH
KMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRLQ
QAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCTG
SQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHGK
INNIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIMENG
DVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKKKE
ILAGPDILSRGFVYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQPFLF
ERTERHPMILPMVMTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttccatcaaaaataatgagaccggcgtctttgctattggtggattaggtgaa
atcgggaaaaatacgtatggggtacaattccaagatgaaatcattttgattgatgccggg
atcaagttcccggaagacgatctacttggaattgactatgtcattcccgactacagctac
atcatacaaaacttgcacaaagtaaaagccctagtgattactcacggacatgaagaccac
atcggcggaataccctacttgctaaaacaagcaaatattcctatctatgctggtcctctc
gcattagcgttgatcacgaacaaattagatgagcatggcttacttcgagaggcagagctt
catgaaatcaatgaagatacgatcattcgttttagaaaaacttctgtcagctttttcaga
acgactcatagtatcccagacgcattaggaatcgtggtgaaaacaccttctggtaatatc
gtagcgactggagacttcaagtttgatttcactcccgttggcgaaccagcaaacttgcat
aaaatggctcgtatcggggaagaaggtgtcttgtgccttttatctgatagtacaaatgct
gagattccaacatttactaaatcagaaaaaacgattggtcattctatcttgaagatcttt
tcaaaaatcgaaggtcgtattatttttgccagctttgcttctaatatcttccgtttgcag
caagcagcagatgccgctgtggcgactggtcgtaaaatcgctgttttcggacgtagcatg
gaaaatgccattgtcaatggccaacgtttaggatatatcaaagttccagacggcacattt
gtagatgcacatgaaatcaatcgcttgcctgctaacgaaacgatgatcctatgtacaggt
tctcaaggggaagcgatggccgctttgagccgtattgcaaatggtacccaccgtcaaatc
caaatccagccagacgatacagtgatcttttcaagttcacctatccctggtaatacaaca
agtgtcaatcatttgatcaacttgctgtctgaagctggcgcagaagtaatccatggaaaa
atcaataacatccatacttccggtcacggtggacaagaagaacaaaaattgatgcttcgc
ttgatgaaaccaaaatattttatccctgtccatggagaattccgcatgctgaaagtccat
gcttctctagcacaagatgtaggtgttcctgcagaaaactgcttcatcatggaaaatggc
gatgttttagcgttaactagcgattctgcacgtcctgctgggcattttgtggctggagat
gtatatatcgatggtagcgggatcggcgatatcggtaatgtcgttttacgtgaccgtcac
ctgctttcagaagaaggtcttgtattagctgttgcaacagtagatatcaagaaaaaagaa
atcttggctggtccagatattctctctcgtggatttgtttacatgcgagaatcaggagaa
atgatcaatgaagctcagcgaatcttattccatgctttaagagaatgtttaaatggacct
gactgttcagaatataaattgaaagaagcgatgactggcgcgcttcagccattcttattc
gaacgtacagaaagacatccaatgattttaccgatggtcatgacaccagatgaagaataa
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