KEGG   Enterococcus faecium T110: M395_10210
Entry
M395_10210        CDS       T03257                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
eft  Enterococcus faecium T110
Pathway
eft03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eft00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M395_10210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eft03019]
    M395_10210
Messenger RNA biogenesis [BR:eft03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M395_10210
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AII39687
LinkDB
Position
2055492..2057171
AA seq 559 aa
MKLSIKNNETGVFAIGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY
IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLREAEL
HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVGEPANLH
KMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRLQ
QAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCTG
SQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHGK
INNIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIMENG
DVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKKKE
ILAGPDILSRGFVYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQPFLF
ERTERHPMILPMVMTPDEE
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgaaactttccatcaaaaataatgagaccggcgtctttgctattggtggattaggtgaa
atcgggaaaaatacgtatggggtacaattccaagatgaaatcattttgattgatgccggg
atcaagttcccggaagacgatctacttggaattgactatgtcattcccgactacagctac
atcatacaaaacttgcacaaagtaaaagccctagtgattactcacggacatgaagaccac
atcggcggaataccctacttgctaaaacaagcaaatattcctatctatgctggtcctctc
gcattagcgttgatcacgaacaaattagatgagcatggcttacttcgagaggcagagctt
catgaaatcaatgaagatacgatcattcgttttagaaaaacttctgtcagctttttcaga
acgactcatagtatcccagacgcattaggaatcgtggtgaaaacaccttctggtaatatc
gtagcgactggagacttcaagtttgatttcactcccgttggcgaaccagcaaacttgcat
aaaatggctcgtatcggggaagaaggtgtcttgtgccttttatctgatagtacaaatgct
gagattccaacatttactaaatcagaaaaaacgattggtcattctatcttgaagatcttt
tcaaaaatcgaaggtcgtattatttttgccagctttgcttctaatatcttccgtttgcag
caagcagcagatgccgctgtggcgactggtcgtaaaatcgctgttttcggacgtagcatg
gaaaatgccattgtcaatggccaacgtttaggatatatcaaagttccagacggcacattt
gtagatgcacatgaaatcaatcgcttgcctgctaacgaaacgatgatcctatgtacaggt
tctcaaggggaagcgatggccgctttgagccgtattgcaaatggtacccaccgtcaaatc
caaatccagccagacgatacagtgatcttttcaagttcacctatccctggtaatacaaca
agtgtcaatcatttgatcaacttgctgtctgaagctggcgcagaagtaatccatggaaaa
atcaataacatccatacttccggtcacggtggacaagaagaacaaaaattgatgcttcgc
ttgatgaaaccaaaatattttatccctgtccatggagaattccgcatgctgaaagtccat
gcttctctagcacaagatgtaggtgttcctgcagaaaactgcttcatcatggaaaatggc
gatgttttagcgttaactagcgattctgcacgtcctgctgggcattttgtggctggagat
gtatatatcgatggtagcgggatcggcgatatcggtaatgtcgttttacgtgaccgtcac
ctgctttcagaagaaggtcttgtattagctgttgcaacagtagatatcaagaaaaaagaa
atcttggctggtccagatattctctctcgtggatttgtttacatgcgagaatcaggagaa
atgatcaatgaagctcagcgaatcttattccatgctttaagagaatgtttaaatggacct
gactgttcagaatataaattgaaagaagcgatgactggcgcgcttcagccattcttattc
gaacgtacagaaagacatccaatgattttaccgatggtcatgacaccagatgaagaataa

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