Enterococcus faecium T110: M395_11440
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Entry
M395_11440 CDS
T03257
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eft
Enterococcus faecium T110
Pathway
eft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M395_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eft03400
]
M395_11440
Enzymes [BR:
eft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M395_11440
DNA repair and recombination proteins [BR:
eft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M395_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
UvrD_C
T2SSE
CbiA
AAA_12
AAA
IMS_HHH
AAA_28
HHH
SLFN-g3_helicase
DUF6386
HTH_IclR
NTPase_1
AAA_29
WHD_TBPIP
HHH_8
nSTAND3
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AII39870
LinkDB
All DBs
Position
complement(2320412..2322982)
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AA seq
856 aa
AA seq
DB search
MQPEEMPYFVGTVAAIFFQNPSNFYKVLLVHISETTADYREKEIVVTGSFGDIQENETYR
FYGELVDHPKYGRQLKVERYEQEKPTTANGIVAYLSSEKFPGIGKKTAEKIVELLGEDAI
EKIIADPSVLKQIAGLTKPKREMLAETIRLNHGMDQVIMGLNRYGFGSQLAFSIYQTYKN
ESLDIIEENPYQLVEDIEGIGFKRADNLAEQIGIAADSPRRIRAAILHQIFQHAVQTGDT
YVPAETLLQQTIRILETSRPIEILPDQVATVIIQLVEEGKIQQEETNLYENSLYFSEWGI
GNSIQRLLSRKKEIHYPEKEVQKNIRRIEKIFGIQYGPSQEQAIAEAIRSPLFILTGGPG
TGKTTVINGIVNLFAELNGLELDPSKYTQEIFPILLAAPTGRAAKRMNETTGLPASTIHR
LLGLNGREKTPSVSTKELEGGLLIVDEMSMVDTWLANTLFKAIPTNMQVILVGDKDQLPS
VGPGQVLHDLLEIEQIPKMELNQIYRQGDGSSIIPLAHEIKEGRLPKDFTKNQKDRSYFR
SDAYQIEPLISKIVEKAKNKGFRAQDIQVLAPMYRGPAGIDALNKMMQEIFNPGRPGKKE
VHWNDTVYRIGDKVLQLVNTPELNVFNGDMGEITGIILAKDSEDKVDELVIQFDANEVTY
KRNEWNKITLSYCCSIHKSQGSEFKMVILPMVHQYQRMLQRNLLYTAVTRSKELLILLGE
EQAYATCVANESASRMTTLKSRIIDNEKMTITLRTKLAAYEDSLIGNDPFEDGTYTKESQ
DIKEKLPIKDDSGTNESKNQVMETVEPDLFSSSVVEEKKEEIEPAVPKEFVLTAEAINQK
LVDPMIGMENITPYTL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaagaaatgccttatttcgttggtacagttgccgcgattttttttcaaaat
cctagtaatttttacaaagtgcttttggtacacatcagcgaaaccacagctgattaccgt
gaaaaagagattgtagttaccggaagctttggcgatatccaagaaaatgagacctatcgt
ttttatggagaactagtggatcaccctaaatacggaagacagcttaaagtcgaaagatat
gagcaagaaaaaccaacaactgcgaatgggatcgtagcttatctttccagcgaaaaattc
cctggaatcggtaagaaaacagcagagaaaatcgtcgagttgctgggagaagatgctatc
gaaaaaatcattgctgatccttcggtattaaaacaaatcgctggtttaacgaagccaaaa
agagaaatgcttgctgagaccattcgtctaaatcacgggatggaccaagtaatcatggga
ttgaatcgttatggattcggtagtcagttagccttcagtatttatcagacctataagaac
gagtctttggatatcatcgaagaaaatccgtatcagctagtcgaagacatagaaggaatc
gggttcaaacgtgcagataatctagccgaacaaatcggtattgcagcagattcacctaga
agaatccgagcagccatcttgcatcagatttttcagcatgctgttcaaacaggagataca
tacgtaccggcggaaacattgcttcagcaaaccatccgtattttagaaacaagtcgtcca
atcgaaattctgcctgatcaggttgctactgtgattatccagcttgttgaagaaggaaaa
atccaacaagaagaaacgaatctttacgaaaacagtttgtatttttctgaatggggaatc
ggcaattccatccagcgtctgctcagccgtaaaaaagaaatccattatcctgaaaaagaa
gtgcagaaaaatattcggcgtatcgaaaaaatattcggtatacagtatggaccctcgcaa
gaacaagcaatcgctgaagccatccgttctcctctatttattttaacaggaggaccaggt
acggggaaaactactgtgatcaatgggatcgtcaatctttttgcagagttgaatggtctg
gaattggatccgtcaaaatatacccaagaaatttttcctattctgcttgcagcacccact
ggccgggcagctaaacgaatgaacgagacaacaggtctgcctgccagtacaatccatcgt
ttacttgggctgaatggacgggaaaaaacaccttcagtcagcacgaaagaattagaaggc
ggacttttgatcgttgatgagatgtctatggtcgatacatggctggctaacacattattc
aaagcgattccgacgaatatgcaggttatcctagtaggagataaagatcagcttccttct
gtcggtcctggacaagtgttacatgaccttttggaaatcgaacaaattcctaaaatggaa
ctcaatcagatttatcgacaaggtgatggttctagtattattcctcttgcccatgaaatc
aaagaaggacgtctaccaaaagatttcacaaagaatcaaaaagatcgttcctatttccgg
agcgacgcgtatcaaattgaacccttgatttctaaaattgtggaaaaagcgaaaaataag
ggattccgtgcacaagatatccaagtattagcaccaatgtatcggggaccagcagggatc
gatgcgttaaataaaatgatgcaggagatattcaatccagggagacctgggaaaaaggaa
gtgcattggaacgacaccgtttatcggataggagacaaagtactccagttagtcaatact
cccgaattgaatgtattcaatggggatatgggagaaatcacggggattatcttggcaaaa
gattcggaagataaagtggatgaattagttatccagtttgatgcaaatgaggtcacttat
aaaagaaacgagtggaataaaattactctttcttattgttgctcgatccataaatcacag
ggcagtgaattcaaaatggtcattttgcccatggtccatcaatatcagcgtatgcttcag
cgtaatctactctacacggcggttactcggagtaaggaactgttgattttgttaggggaa
gagcaagcgtatgccacttgtgtagcgaatgaatcggcaagccgaatgactacgttgaaa
tcaagaatcatcgataatgaaaaaatgactatcactctgcggacaaaactagcagcttat
gaagattctttgattggaaatgatccatttgaagatgggacctatacgaaagagtcgcag
gacataaaagaaaagttacctataaaagacgacagtggaacgaatgaatcgaaaaaccaa
gtaatggaaacagtagaaccagatctgttttcttcatcggttgtggaagaaaagaaagaa
gagatagaacctgctgttcctaaggagttcgttcttactgcagaagcgattaatcagaaa
ttagtagatccaatgattggtatggaaaacattacaccgtatacattataa
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