Enterococcus faecium DO: HMPREF0351_10160
Help
Entry
HMPREF0351_10160 CDS
T02120
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
efu
Enterococcus faecium DO
Pathway
efu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0351_10160 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efu03019
]
HMPREF0351_10160 (pnpA)
03016 Transfer RNA biogenesis [BR:
efu03016
]
HMPREF0351_10160 (pnpA)
Enzymes [BR:
efu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF0351_10160 (pnpA)
Messenger RNA biogenesis [BR:
efu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF0351_10160 (pnpA)
Transfer RNA biogenesis [BR:
efu03016
]
Prokaryotic type
tRNA degradation factors
HMPREF0351_10160 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
Transcrip_act
Motif
Other DBs
NCBI-ProteinID:
AFK57784
UniProt:
Q3XXG1
LinkDB
All DBs
Position
156099..158309
Genome browser
AA seq
736 aa
AA seq
DB search
MKAAQKTAFGSFHLFSSVLLSREGKGEVMSEKQVFKTTWGGRPLQIEVGQLAKQANGAVL
VRYGDTVVLSAAVASKEAKDTDFFPLTINYEEKMYAAGKIPGGFIKREGRPSTEATLTAR
LIDRPIRPMFAEGFRNEVQVTNIVMSVETDCSPAMAAMLGSSLALSISDIPFDGPIAGVE
VGRVNGEYVLNPTVEQAEQTDIELTVAGTKQAINMVESGAKEVSEEDMLGALLFGFDAIK
ELVAFQEEIVQAVGKEKMEVTLLQVDEVLKKEIFDASYATMKAAVMTEEKLAREDNIEQV
KIDIREAYAEKFAGHEDEDHLLKEVKQITEDLEKDVVRELITIDKIRPDGRKLDEIRPLS
SEVSLLPRVHGSGLFTRGQTQALSACTLAPLGEHQIIDGLGVEVSKRFIHHYNFPQFSVG
STGRAGSPGRREIGHGALGERALAQVIPSEEEFPYTIRLVAEVLESNGSSSQASICAGTL
ALMDAGVPIKAPVAGIAMGLVSDGENYTILTDIQGLEDHLGDMDFKVAGTKDGITALQMD
IKIQGITEQILTEALTQAKQARMEILEELTSTIAAPREELSQYAPKIEMIQIEPAKIKDV
IGKGGDTINGIIDETGVKIDIDQDGKVSIASADAEMIKKAIKIIEDLTKEVKVGEVYLGK
VVRIEKFGAFVNLIKGKDGLVHISQLANDRVNKVEDVVKLGDEILVKVTEIDKQGRVNLS
RKAMLNEDGSTKNEEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgctcaaaagacggctttcggcagttttcatttgtttagtagcgtcttgctt
tcacgagaaggaaaaggagaagttatgtcagaaaaacaagtattcaaaacgacatggggc
ggccgtcccttacaaatcgaagtcggtcagctagcaaaacaagcaaacggagccgtttta
gtccgttatggagatacagtagtcttaagtgcagctgtggcctctaaagaagcaaaagat
acagactttttcccattaacgatcaattatgaagaaaaaatgtatgcagcagggaaaatc
cctggaggtttcatcaaacgagaaggccgtccaagtacggaagcaacattgactgcccgt
ttgatcgaccgtccaattcgcccgatgtttgcagaaggcttccgtaatgaagtccaagta
acgaacatcgtgatgagtgtagaaacagactgctcgccagctatggcagcaatgctaggt
tcttctttagcactatcaatctcagatatcccatttgacggcccaatcgcaggcgtagaa
gttggtcgtgtaaatggcgagtacgtcttgaatccaacagtagaacaagcagaacaaaca
gatatcgaattgactgttgccggaacgaaacaagccatcaatatggttgaaagcggcgcg
aaagaagtttcagaagaagacatgcttggtgcattgctgtttggttttgacgctatcaaa
gagttagttgctttccaagaagaaatcgttcaagcagtagggaaagaaaaaatggaagtg
actttactgcaagttgatgaagtattgaaaaaagaaatctttgatgcttcttacgctaca
atgaaagcagcagtaatgactgaagaaaaacttgctcgcgaagataatatcgagcaggtg
aagatcgatatccgcgaagcttatgctgagaaatttgcaggtcatgaagatgaagatcac
ttgttgaaagaagttaaacaaatcacagaagatcttgaaaaagatgtcgtacgtgaattg
atcaccatcgataagatccgtcctgacgggcgtaaattggatgaaatccgtccattgtca
tcagaggtcagcttattgccacgtgtacatggatcaggtttgttcacacgaggacaaaca
caagctttatcagcttgtacactcgcacctctaggagagcaccaaatcattgatggttta
ggggtggaagtcagcaaacgattcatccaccactacaatttccctcaattttctgttggt
tctacaggacgtgcaggctctccagggcgtcgggaaatcggacatggcgcattaggtgaa
cgtgcgttagcacaagtaatcccttcagaagaagaatttccttatacgatccgtttagta
gcagaagtattggaatcaaatggttcttcttcccaagcaagtatctgtgctggcacatta
gcattgatggatgcaggtgtaccaatcaaagcgccagtcgccggtattgcgatgggactt
gtttctgatggtgaaaactatacgatcctaactgatatccaagggctggaagatcatctt
ggcgatatggactttaaagttgccggtacaaaagatggtatcactgctttacagatggat
atcaagattcaaggaatcacagaacaaatcctaactgaagcattaactcaagcaaaacaa
gcacgtatggaaatcttagaagaattgacttcaacgattgctgctccacgtgaagaatta
agccaatatgcaccaaaaatcgaaatgatccagatcgaacctgctaaaatcaaagatgtt
atcggtaaaggcggcgatacgatcaacggaatcatcgatgaaactggtgtgaaaatcgat
atcgatcaagatggaaaagtaagtattgcttcagctgatgcagaaatgatcaaaaaagct
atcaagatcatcgaagatttgaccaaagaagtcaaagttggtgaagtttatctagggaaa
gttgtccgtatcgaaaaattcggtgcattcgtcaacttgatcaaaggaaaagatggactt
gtccatatttcccaattagcaaacgatcgtgtcaataaagtcgaagatgttgttaaacta
ggtgatgagatccttgtgaaagtaactgaaatcgataaacaaggacgcgtaaatctgtca
agaaaagcaatgttgaacgaagatggttcaacgaaaaatgaagaaaaataa
DBGET
integrated database retrieval system
