Enterococcus faecium DO: HMPREF0351_10397
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Entry
HMPREF0351_10397 CDS
T02120
Name
(GenBank) superfamily I DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
efu
Enterococcus faecium DO
Pathway
efu03420
Nucleotide excision repair
efu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0351_10397
03430 Mismatch repair
HMPREF0351_10397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_10397
Enzymes [BR:
efu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0351_10397
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0351_10397
MMR (mismatch excision repair)
Other MMR factors
HMPREF0351_10397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C_2
SLFN-g3_helicase
AAA_30
DEAD
UvrD_C
AAA_16
FtsK_SpoIIIE
APP1_cat
DUF5734
Motif
Other DBs
NCBI-ProteinID:
AFK58021
UniProt:
Q3Y0P8
LinkDB
All DBs
Position
381198..383333
Genome browser
AA seq
711 aa
AA seq
DB search
MVNTQKQLEEAYLKNVYQKLIDKKNELRESMDTAKIEGNQSLKEMAGELRLNFDSYLDNL
DTFSMIEMKNREIDQMNIKQKNAENQLAKIERLLKSPYFGKVVVDFLDNEPKESFYIGTA
NFTDDADENLVYDWRSPIAELFYNNMIGPSSYTVRQNKIDTVIKERRQFLLERDRLVKFF
DTSVAIQDDVLLEVLGQDETNEMKAITATIQSEQNTIIRDVKSQNILVNGVAGSGKTSAI
MQRIAYLLYLYRDTMTSDDLLILSPNHRFIDYISNVLPSLGERNPLNLTIIQLVSQLSAE
EIEGEEAYFKRITGENVSEQTERLRSKKFIDNLKQSDPLFLDHPNFIRGLTKNGKTVLSK
KTIEKIYEKVPAHPKLIDRLQATKKALMSEWKNHLLKQAKSPAVQNQVLSLTEDRQLELF
GKLISDDSEQSIVAYARKLLQKKYRKITRQIEEMAWVDEHQLFERIYEKRYGSAYAWQPT
RTVDEAVIILAIRHLLVEKVNVPAFRYLLIDEVQDYTLAQLGLLIELFPKTHFTLVGDEN
QAIFNSSTTFADIMRCFDDYHLPIHRYDLRNSYRSSGAITELFKTYAVDQEKIDIVSIRP
QGKEPEYRSFRSSEELLKILAEILVSLKGEKAAVITQTEEETQTLQESIKKNSYGLENCQ
IIPLSLAKGLEFDHVILYPFENDGDEQRRRRQMYTAISRGMKSIVVLERAT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacacaaaaacagttagaagaagcatatctgaagaacgtgtatcaaaagcta
attgataaaaaaaacgaactgcgggaatcgatggatacggcaaaaatagaaggaaaccag
tcgttgaaagaaatggctggcgagcttcgattgaattttgacagttacttagataacctg
gatactttttcgatgattgaaatgaaaaatagagaaatcgatcagatgaatatcaaacag
aaaaacgcagaaaatcagctagcaaagatcgaacgtttattgaaaagtccctactttgga
aaagtcgttgtagactttctggataatgagccaaaagaatccttttatatcggtacagca
aatttcacagatgatgcagatgaaaatcttgtttatgattggcgttcaccaattgccgaa
cttttttacaataacatgattggtccatcttcttatacggttcgtcaaaataaaatcgat
acggttattaaagaaagacgacaatttcttttggaaagagatcgtttggtcaagtttttt
gatacgtctgtagctattcaagatgacgtattattagaagtcttaggccaagatgagacc
aatgaaatgaaggctatcactgctacgatccaatcggaacaaaacacaatcattcgggat
gtgaaaagtcaaaatatcttggtaaatggcgtagcaggaagtggtaaaacctctgctatc
atgcagcgtattgcgtatctgctctatttatatcgagatacgatgacatccgatgacttg
ctgattctatcacctaatcatcggtttatcgactatatttcgaatgtcctaccatcatta
ggtgaaagaaatccactgaatctaaccatcatacagctggtttcacagctttcagcagag
gaaatagaaggtgaagaggcttatttcaaacgtatcacgggagaaaatgtatcggagcag
acagaacgtttgcgtagcaaaaagtttatcgataatctaaaacaatcagatcctttgttt
ttagatcatccgaattttatccgtggacttactaaaaatggaaaaacagtcctttctaaa
aaaacgatcgaaaaaatatatgagaaagttcctgctcatcctaaattgatcgataggctt
caagcaacgaaaaaggcactgatgagcgaatggaagaatcatcttttgaaacaagcaaaa
agtcctgctgtgcagaatcaggtactctcgttgacagaagataggcagttggaattattc
ggtaaattgatttctgatgattcggaacaaagtattgtagcttatgcaaggaaactttta
caaaaaaaatatcgaaaaataaccagacaaatcgaagaaatggcatgggtggatgagcat
cagttgtttgaaagaatttatgaaaaacgatatggctcagcttatgcttggcaacccaca
cgtactgttgatgaagcagtcattatattagctattcgtcatttacttgttgaaaaggta
aatgtaccagcatttcgctatctattgattgatgaagtacaagattataccctggcacaa
ttaggtctattgatcgaattatttccaaaaactcactttactttagtaggtgacgagaat
caggcaatctttaattcttccactacttttgctgatattatgcgttgtttcgacgactac
catctgccgatccatcggtatgatcttagaaatagttaccgttctagcggagcaatcaca
gagcttttcaaaacctatgctgtggatcaagagaagatcgacatcgtatcgatccgaccg
caaggaaaagaacccgaataccgctcttttcgatcctctgaagaattgttgaaaatacta
gctgagattttggtttctctaaaaggagaaaaagcggcagttatcacccaaacagaagag
gaaacccaaacgctacaagaatcgattaaaaaaaattcatatggattagaaaactgccaa
atcattcctttgagtctagcaaaaggactggaatttgatcatgtaatcttatatccattt
gaaaacgatggagatgagcaaagaagacgcagacaaatgtacacggcgatatctagagga
atgaaaagcattgtcgtattggaaagagcaacataa
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