Enterococcus faecium DO: HMPREF0351_10547
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Entry
HMPREF0351_10547 CDS
T02120
Symbol
fms12
Name
(GenBank) LPXTG family cell surface protein Fms12
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
efu
Enterococcus faecium DO
Pathway
efu00040
Pentose and glucuronate interconversions
efu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HMPREF0351_10547 (fms12)
Enzymes [BR:
efu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
HMPREF0351_10547 (fms12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Beta_helix
Gram_pos_anchor
DUF1565
Motif
Other DBs
NCBI-ProteinID:
AFK58171
UniProt:
I3TZI3
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All DBs
Position
540824..544066
Genome browser
AA seq
1080 aa
AA seq
DB search
MNLLMLSTPVLISVVEVAANEQQSVNEENAHVNIEGMSTMEEIPRTSEDMDTEEGNDPMM
KESENEKTKKQSEEANEEWKGVVFGESTSASRYAIEPLEDGVRLSSTNNGGKFQSSGSDG
MTYYYQAIPKDINFRMRATIEIESWTYTNAQEGFALMVRDAVPKNHLFGQAFYSNSFAIL
GSRIEYVWDSDRQEVVNTSGSKYTMRLGLGTRAITGISSEDPQAAPAPGSVSVETTPLET
SAGFLEKETGSYNIFGNGHGNLFPATNSITKLDVEMKKTNTGLEAYYYDPETGEEMASDI
MYDWEKLYASDESVIYAGFAAARNMTIKVEGIEVAYSDPATDPPGQERPTRLIDPIYTVT
SSNHSGNQDHTMSFRANADGLLTIKNKATGEVLKNAKNLAITANREFDYQTKLMEGTNEF
TFSFTPDKNYPPEEYVEMTSYETKEILHTVDYRKPKYSTVYVTPEGSDAGNGSRQNPLSL
TQALRYAYAGQTIVMAPGTYSFERGLTIPKGVNGTRENPIQLIAEKNPENKRPVLDFKGT
GNGMTLFSHYWGLRGFDITNSAAMQKGLQISGNHNLIEEIHAYRNGNTGIQISGSSNDPF
EAWPAHNLVKNCTSFENADPGFEDADGFAAKLTIGEGNVFDGCIAYHNADDGWDLFAKNE
TGSIGKVIIKNSVAYRNGWVPGIEGEGNGNGFKMGGSSLTGPHELINSLSFENLAKGIDS
NSGTDIIVNSSTSFNNGSYNVALYTSSAGNTDYHASGILSFRTENLEMREQIRPLNQNED
QIYHSLNYYWNEREKQSENTLGHTISKDWIESLNTCSKEGQQPVTRYENGSIHVHGLMQI
KPGNRQTEKERVDGLPLSVGAIFDGETSPSSEYPEYAIVQEPNQTKPNEQNNPIIIQEAN
GVAENAEGNIIELKPFTVFVSTFTPNQGTPVFEDMRYFPEKIQIVETQSSAQFSNHTAIF
SAPSKGEYTLEVTYRSEIFDGEKWSAHTESVTQQKAITVRETADVPPGNDKPERENPGNE
SPNGKPNGKPSHPDRTAKESEKNGTQGLPKTGEFNNPLLALAGGILLIGVVVYVMKQRKK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccttatgctcagtaccccggttttaatttctgtcgttgaagttgctgctaac
gaacaacagtctgtgaacgaagaaaatgcacacgtgaacattgaagggatgtcaacaatg
gaggaaataccaagaactagtgaagatatggatacggaagaaggaaatgatcctatgatg
aaagaatcagaaaatgaaaagacaaaaaagcaatctgaagaagcaaatgaagagtggaaa
ggggttgttttcggagaaagcacaagtgctagtaggtatgccattgaaccattagaagac
ggcgtgcggctctcttccacgaataacggcggaaaattccagtcaagcggatcagatgga
atgacctattattatcaagcaatccccaaagacatcaactttaggatgcgggcgacgatc
gaaatagaatcttggacctatacgaatgcccaagaaggatttgctttaatggtaagagac
gcagtaccaaaaaatcatttgtttgggcaggcattttattcaaattcatttgccatacta
ggcagtcggatcgaatatgtctgggactcggatagacaagaagtggtcaacacgagcggc
agcaaatatacgatgcgacttggattggggacacgggcaatcacaggaatatcatctgaa
gatccgcaagctgcgccagctcctgggagtgtctcagtggaaacaacacctttagagact
tcagcagggttcttggaaaaagaaacaggttcttataatatattcggaaacggtcatggg
aatctgtttccggccacgaactcgattactaaactggacgtagagatgaaaaaaacgaat
actggtttagaggcatattattacgatcctgaaacaggagaagaaatggcttctgacatc
atgtatgactgggaaaaattatacgcttcagatgaatcggttatttatgcaggatttgct
gcagcaaggaatatgacgatcaaggtagaaggaatcgaagttgcttactcagatcctgcg
acagatcctcctgggcaagaaagacctactcgcttgattgatccgatttacactgtgacc
tctagtaatcattcaggaaaccaagatcatactatgtcctttagagcaaatgctgacgga
ttattgacaattaaaaataaagcaacaggagaggtgcttaagaacgcaaaaaacttggct
atcactgcgaatcgggaatttgattatcagacaaaactgatggaaggaacgaacgaattt
actttcagttttacgccagataaaaactatccgccagaagaatacgtagagatgactagt
tatgaaacaaaagagattcttcatacagtggactaccgtaaacctaaatattcgacagtt
tatgtaacaccagaagggtcagatgcaggaaacggaagcagacaaaatccattatctctg
acacaagcattgagatacgcatatgctgggcagacaatcgtcatggcgcctggaacttat
tccttcgaaagaggattgacgattccaaaaggcgttaacgggacaagagaaaacccgatt
cagttgattgcagagaaaaatccagaaaacaagcgtcctgtacttgattttaaaggaact
ggaaatgggatgacactgttcagtcactactggggtttacgagggtttgacattacaaat
agtgcagctatgcaaaaaggattacagatttctggaaatcataatttgatcgaagagatt
catgcttatcggaatggaaatacaggaatccaaatcagcggtagctcaaatgatcctttc
gaagcatggcccgcgcataacttagtcaagaactgtacatcttttgaaaatgccgatcca
ggatttgaagatgccgatggatttgcggccaaactgacaataggagaaggaaatgtattt
gacggttgtatcgcgtatcataatgcagatgacggttgggacctttttgctaaaaatgaa
acaggttcgatcggaaaagtaatcatcaaaaactcagttgcttatcgaaacggctgggta
ccaggaattgagggagaaggtaacggtaatggattcaaaatgggcggttcttctttaacg
ggccctcatgaattgatcaatagtttgtctttcgaaaatcttgcgaaaggaatcgattcc
aatagcggaacagatattatcgtcaatagcagtacaagttttaataacggttcatataat
gtggctctttatacctcttcagcaggaaacacagactaccatgcttctggtatcttatct
ttccgaacagagaatcttgagatgagagagcagatccgcccattgaatcaaaacgaagat
caaatctaccactcgttgaactactattggaatgaacgagagaaacaatcagaaaatact
cttggacataccatatcaaaagattggatcgagtctctaaatacatgttcgaaagaaggt
cagcagcctgttacgcgctatgaaaatggaagtatccatgttcatggactgatgcagatt
aaaccggggaatcgtcaaacagaaaaggaaagagtggatggtcttccattatctgtaggt
gctatttttgacggagaaacctcaccgtcttcggaatatccagagtatgcaatcgtacaa
gaaccaaatcagacaaaaccaaatgaacaaaataatccgattattatacaagaagcaaat
ggtgtggcggagaatgcagaaggaaatatcattgaactgaagccttttacagtttttgtg
tcaactttcacaccaaatcaaggaacgcctgtctttgaagatatgcgttatttcccagaa
aagatccaaatcgttgaaacacagtcaagtgctcaattttctaatcataccgctattttt
tcagcaccttcaaaaggagaatatacgctagaagtcacttatcgttcggaaatatttgat
ggggaaaaatggtctgctcatacagaatctgttacccagcaaaaagcgatcactgtgcga
gaaactgccgatgtgcccccgggaaatgacaaaccagaaagagaaaatccaggaaatgaa
tcaccaaatggaaaaccaaatggaaaaccttctcatccggataggacagcaaaagaaagt
gaaaaaaatggcactcaaggactcccaaaaacgggagaatttaataacccgttgctagca
ttagctggaggaattttgttaatcggtgtagttgtttatgtcatgaaacagcgaaaaaaa
taa
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