Enterococcus faecium DO: HMPREF0351_10680
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Entry
HMPREF0351_10680 CDS
T02120
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
efu
Enterococcus faecium DO
Pathway
efu03030
DNA replication
efu03430
Mismatch repair
efu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0351_10680
03430 Mismatch repair
HMPREF0351_10680
03440 Homologous recombination
HMPREF0351_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efu03032
]
HMPREF0351_10680
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_10680
Enzymes [BR:
efu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0351_10680
DNA replication proteins [BR:
efu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0351_10680
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0351_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFK58304
UniProt:
Q3Y1W6
LinkDB
All DBs
Position
complement(680954..681559)
Genome browser
AA seq
201 aa
AA seq
DB search
MFFVKFICFFQKYVTVISQGGFTEMNFVAMDFETANHQPYSACSLALVMVKNSQIVDEFY
TLIQPETPFFWRNVQIHGIHQEDVRNAPKFPEVWQTIQPYFQKNRLVVAHNAAFDTKVLA
GCLDYYHLEQPNYLSLCTVKSSRRLFPEFPNHRLNTVCENLNIQLDHHHDALEDSRACAE
ILLYQEKKFGTDPLKKLVTIK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgttaaatttatttgcttttttcaaaagtatgttacagtaatttcccaagga
ggttttacagaaatgaattttgttgccatggattttgaaactgccaatcatcagccttat
agtgcttgttctcttgcgctagtcatggtaaaaaatagccagatcgttgatgaattctat
acattgatacagcctgagactccttttttctggcgaaatgtccaaattcacggaatccat
caagaagacgtacgcaatgcgccgaaattcccagaagtctggcaaactatccaaccatat
tttcaaaaaaatcgtttagtcgttgcacataatgctgcttttgatacaaaggtcttagcg
ggatgcttagattattatcatcttgaacagcctaattatctttctttatgtacagtgaaa
agtagccgtcgcctgtttcctgaatttccaaatcatcgattgaacactgtgtgcgaaaat
ttgaacatccaattagatcatcaccatgatgcattggaagatagtcgtgcatgtgcggaa
atcctgctttatcaagaaaaaaaattcgggacagatccattgaaaaaacttgtgactata
aagtaa
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