Enterococcus faecium DO: HMPREF0351_11110
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Entry
HMPREF0351_11110 CDS
T02120
Symbol
hup
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
efu
Enterococcus faecium DO
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efu03032
]
HMPREF0351_11110 (hup)
03036 Chromosome and associated proteins [BR:
efu03036
]
HMPREF0351_11110 (hup)
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_11110 (hup)
DNA replication proteins [BR:
efu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HMPREF0351_11110 (hup)
Chromosome and associated proteins [BR:
efu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HMPREF0351_11110 (hup)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HMPREF0351_11110 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
Glycos_trans_3N
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFK58734
UniProt:
I3U146
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All DBs
Position
1098337..1098612
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AA seq
91 aa
AA seq
DB search
MANKAELIEKVASATDLTKKDATAAVDAVFSTIQDALANGEKVQLIGFGNFEVRERAARK
GRNPQTGEEIEIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattaatcgaaaaagttgcttcagctactgatttaactaaaaaa
gatgcaactgcagcagtagatgctgtattttcaactattcaagatgctttagctaacggc
gaaaaagttcaattaatcggttttggtaactttgaagttcgcgaacgcgcagctcgcaaa
ggtcgtaacccacaaactggtgaagaaatcgaaattccagctagcaaagtacctgcattc
aaaccaggtaaagcattaaaagacgctgttaaataa
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