Enterococcus faecium DO: HMPREF0351_11280
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Entry
HMPREF0351_11280 CDS
T02120
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
efu
Enterococcus faecium DO
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_11280 (addA)
Enzymes [BR:
efu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0351_11280 (addA)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HMPREF0351_11280 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
ApoC-I
DUF16
Motif
Other DBs
NCBI-ProteinID:
AFK58904
UniProt:
Q3XZV9
LinkDB
All DBs
Position
1262637..1266359
Genome browser
AA seq
1240 aa
AA seq
DB search
MNQIPLKPQNERFTDDQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKMGFDIDELL
IVTFTEAAAREMKERIQEALQEAVNSESDPVRRQHFTKQLVLLPTANISTLHAFCLTVIR
RYYYLIDIDPVFRMLTDETETILMKEDVWDELREALYAENDERFFQLTMNFSNDRSDDGL
TNLVFSLYEFARANPDPKKWLEQLSDNYRLPEGLAKSRLYQEQIRPLVLADIYQCVQLYE
QMTQLAQGEGLEKMHEQVAGEQQQIKNIYEAFSQDRLEEAYAGLEQLTFSTFKSSRKAEL
KEISNEVKGMRDKAKKLIQQISKSYFPVSPSQMEELTDKALPLVEEMTKVTQSFMDGFSM
RKREKGVLDFNDLEHLALQILTEKTKDAWLPSEASKHYRKKFKEVMVDEYQDVNQLQEAI
LYWLREPDDTKGNMFMVGDVKQSIYSFRLADPSLFIGKYENFSKKEGGRRIVLAENFRSR
KEVLSFTNLIFEQLMDPAVGQINYDEAAKLIQGFSDFPENEQFEPEIMIYEKEQEESEIE
IPTDDILEDKTEGELFMTGLKIRQLIDSSFMIYDKKSKKSRPIEYKDIVLLTPTKKNNLT
ILEIFKTLDIPLEMKDAQNYFQATEIRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPE
LASIRLADRAHTYYDAVLAYQASNEDELAAKLEHFGKQLEHWRELARRSSITDLLWDIYY
ETGYLEYVVGLPAGAQRQANLYALVDRAKAYEQSSFRGLYQFVRFIEKMQEKDKDLAEPV
ISIEDNAVRVMTIHASKGLEFPVVFLLDMTKEFNLQDLRNRYAFEEKLGAGIRYMDPETR
VLYDTLPFQAIKLVKQNKLLSEEMRKLYVGLTRAEQKLFIVGSYKNKEQMIQTWSEAADH
EELVFDPALRLKGRSSLMNWIGYGLIRHPEMQKYLEEEISTSLLQHSNAQFSISWMNQQS
IIEQRQLLAEKELVNLDQQMKEDETLLADSLQKRLAYEYPYQASSQTTSYQSVSEIKRLF
EDPDDTQESRLTLESSQNKAASRQFRYTQEQLAEPKFLQKDRQVSAAAVGTATHALLQLL
PLEMPTTESIHQKLQELVRKRLVDEKVAKKVDVSSIIWFFQTELGQQLIANKENVKREQP
FSMLLPADEVFQDYPNQEDELLIHGIVDGYLEEKDHLNIYDFKTDFILHPDDPAEIDAIV
QKYQGQLRLYQQAMSEALNKPVENVFLILLRVKQIININK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaaattcctttaaaaccgcaaaatgaacgattcacagatgatcagtggcaagcg
atttttgatcaaggagataatctattagtctctgcgtctgccggatcaggtaaaactaca
gtgcttgttcgaagagtgattgaaaaactaaaaatgggttttgatatcgatgaattattg
attgtgacatttactgaagctgccgcaagagaaatgaaagaaagaattcaagaggcatta
caagaagccgtcaatagcgaaagtgaccctgtacgtagacagcattttactaagcagtta
gttttattgcccacagcgaatatctcaaccttacatgctttttgcctgacagttattcga
cgttattattacttaattgatattgatccagtctttcgtatgttaacagatgaaacagaa
acgatcttgatgaaggaggatgtgtgggatgagctgagagaagcactttatgcagaaaat
gatgaacgatttttccaattaacaatgaatttttctaatgatcgttcagatgacggcttg
acgaatctggtgttttctctttatgagtttgcccgtgccaaccctgaccccaaaaaatgg
ctagaacagttaagcgataattatcgtttgcctgaggggctagcgaaatctcgattatat
caagaacaaatccgtcctttagttttggcagatatataccaatgtgtacaattatatgaa
cagatgactcagttagcacaaggtgaaggattagaaaaaatgcatgagcaagtagctgga
gaacaacagcagatcaagaatatctatgaagcgttctcgcaagatcggttagaagaagct
tatgctggtttggaacaactaactttttcaacttttaagagcagtcggaaagcagaattg
aaagaaatttccaatgaagtcaagggcatgagggataaagcaaaaaaactgattcagcag
ataagtaaaagttattttcctgtttccccaagccaaatggaagaattaacggacaaagca
ctaccgttagtcgaagaaatgacaaaagtcacgcaaagcttcatggacggtttcagtatg
cgtaaacgggaaaaaggtgtgctggatttcaatgatctggaacatttagcgttgcagatt
ctcacagaaaaaacgaaagatgcatggctgccaagtgaagcttcaaaacattatcgaaaa
aaattcaaagaagtaatggtagatgaatatcaagacgtgaaccaattacaagaagccatt
ttatactggctaagagaacctgatgatacaaaaggaaatatgttcatggttggggatgtc
aaacaatccatctattctttccgtttagcagatcctagtttatttatcgggaaatacgag
aatttctcaaagaaagaaggcggacgtcgaatcgttttggctgagaacttccgctctaga
aaagaagtcctttcttttacgaatcttatttttgaacaactaatggatccagcagtgggt
caaatcaattatgacgaagcagccaaactgatccaaggattttcagactttccagagaat
gaacagtttgagccggaaatcatgatctatgaaaaagaacaggaagaatcagagattgag
attccgacggatgatatactggaagacaaaacagaaggcgaactttttatgacaggacta
aaaattcgtcaattaattgattcctcctttatgatttatgataaaaaatcaaaaaaaagt
cgtccgatagagtacaaagacattgttctcttgacacctacaaagaagaacaacttaacg
attttagagattttcaaaacattggatattccattagagatgaaagatgctcaaaactat
tttcaagcgacagaaattcgcacgatgatctcgctgctacaattaatcgataatccctat
caagatattccgcttgcggctgtattgcgctcaccgatcgtgggtctgattgaaccagaa
ttagccagcattcgattagctgaccgtgcacatacttactatgatgctgtgcttgcttat
caagcatcaaacgaagatgaattagcagctaagctggaacattttggcaagcaactagag
cattggcgagaacttgctcgccgttcttcgatcactgacttgttatgggatatctattat
gagacgggatatctagagtatgtggtcggtctgccagcaggggcacagagacaagccaat
ctttatgcattggttgatcgtgccaaagcttacgagcaaagttctttcagaggattatac
cagttcgtgcgtttcattgaaaaaatgcaagaaaaagataaagacttagcagaaccagtc
atttcaatagaagataatgctgttcgcgttatgacgatccatgcaagtaaaggcttggaa
ttcccagttgtatttttgttagatatgacaaaggagttcaacttacaagacttgcgcaat
cggtatgcttttgaagaaaaacttggagcaggaattcgctatatggatcctgaaacacga
gtgttatatgatacgttaccgtttcaagccatcaaattggtaaagcaaaacaaattgttg
tcggaagaaatgcgtaaattgtatgtaggattgactcgggcagaacaaaagcttttcatt
gtcggttcctataaaaataaagagcaaatgatccaaacgtggtctgaagcagctgatcat
gaggagttggtttttgatcctgcgctacgtttgaagggcagaagcagcttgatgaattgg
attggttacggattgatccgtcatcctgaaatgcagaaatacttagaggaagaaatttcg
acttctcttcttcaacattcaaatgcacagttttctatttcatggatgaatcagcaatcg
atcattgaacaaagacagttgcttgctgaaaaagaactggttaacttagatcagcagatg
aaagaagatgaaactttattagcagattcgttacaaaaacgtctggcatatgaatatcct
tatcaagcttcttcacaaaccacaagttatcaatctgtatctgaaatcaaacgattattc
gaagatccagatgatacacaagaatcacgtttgactctggaaagcagtcagaacaaagca
gcatcccgtcaatttcgttatacgcaagaacaactagcagaaccaaaatttttgcaaaaa
gatcggcaagtgtcagcagctgctgttggaactgctacgcatgctttgttacaattactg
ccattagagatgccaactacagagagtatccatcaaaaattacaggaattggtaaggaaa
cggttagtagacgaaaaagtcgcgaaaaaagtagatgtttcttctattatatggttcttt
caaacagaacttggtcaacagctgattgccaacaaagaaaacgtaaaacgagaacaacct
ttttccatgctgcttcctgctgacgaagtatttcaagactatccaaatcaagaagatgaa
ctattaatccacggaatcgtcgatggatacctagaagaaaaagatcatctcaatatctat
gattttaaaacagattttattttacatccggatgatccagcagaaatagatgcaatcgtc
caaaaatatcaaggacagctaagactttaccaacaagcaatgtcagaagctttgaataag
ccagtagaaaatgttttcctaattttgcttcgagtgaaacaaattataaacattaacaaa
taa
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