Enterococcus faecium DO: HMPREF0351_11562
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Entry
HMPREF0351_11562 CDS
T02120
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
efu
Enterococcus faecium DO
Pathway
efu03030
DNA replication
efu03410
Base excision repair
efu03420
Nucleotide excision repair
efu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0351_11562 (polA)
03410 Base excision repair
HMPREF0351_11562 (polA)
03420 Nucleotide excision repair
HMPREF0351_11562 (polA)
03440 Homologous recombination
HMPREF0351_11562 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efu03032
]
HMPREF0351_11562 (polA)
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_11562 (polA)
Enzymes [BR:
efu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0351_11562 (polA)
DNA replication proteins [BR:
efu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HMPREF0351_11562 (polA)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HMPREF0351_11562 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0351_11562 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFK59186
UniProt:
I3U2E8
LinkDB
All DBs
Position
complement(1531777..1534422)
Genome browser
AA seq
881 aa
AA seq
DB search
MTKNKLLLVDGNSVAFRAFFPLHNSLERFKNRNGLHTNAIYAFNTMFENVMQKEQPTHVL
VAFDAGKTTFRTEMYAEYKGGRSKTPGEFKEQMPYIRDLLTGLGVQYYELPNYEADDIIG
TLAEKVDKDQFDVVVLSGDRDLTQLASKEVKVDITVKGVSDIESYTPEHVAEKYDGLTPK
QIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIYEHIDEMKQSKMKENLINDK
EQAFLSKKLATINTSAPVDVSIDSLKYEGKNLDKLVPFYKEMDFNQFLSKLNIVEEEVKM
DDILFEVVHEFKEEMFTTDMALYVEMMGDNYHTEEIVGVAWGTEKKIYVTNDLSVFENRA
FHSWITDPTRLKKVYDAKRTYVALNRYTGKTKGIDFDVLLGAYLLDTNEKSTDIEGIAAH
YGYNDIQSDEAVYGKGAKKGLPEEEELFFAHLARKVAAINALTPKLSQELAEKNQEDLFR
KMELPLSIILAEMEISGIKVDATRLQEMKGEFSARLREIEQKIYEEAGEEFNLNSPKQLG
VILFEKMGLPVIKKTKTGYSTAVDVLEQLREQAPIVEDILTYRQIAKIQSTYVEGLLKVI
QSDGKVHTRYVQTLTQTGRLSSVDPNLQNIPIRLDEGRKIRQAFVPREKDWLIYSSDYSQ
IELRVLAHISNDEHLKAAFLEGQDIHASTAMRVFGIEKAEDVTPNMRRQAKAVNFGIVYG
ISDYGLSQNLGISRKAAQQYIDTYFEKYPGVKEYMERIVREAKDQGYVETLYHRRRYLPD
INSRNYNIRSFAERTAINTPIQGSAADILKIAMIELDKRLKETGLQATMLLQVHDELVFE
VPEKELESLDKLVKEVMEQAVSLHVPLITDSSWGKTWYEAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaataaattattactcgttgatgggaacagtgtggcttttcgcgcattcttt
ccgcttcacaattctcttgaacgtttcaaaaatagaaacggtcttcatacaaatgcaatc
tatgcattcaatacgatgtttgaaaatgttatgcaaaaagagcaaccgactcatgttctg
gttgcgttcgatgcaggaaaaacgacttttcggacagaaatgtatgcggagtacaaaggt
ggaagatccaaaacacctggcgaattcaaagaacaaatgccatatatacgtgatttgttg
acaggactaggggtacagtattacgaattgcccaattatgaagcagatgatattatcggt
actttggcagaaaaagtagacaaagatcaatttgatgtcgtcgtgctttcaggtgatcgg
gatttgactcaattagctagtaaagaagtaaaagtggatatcactgtaaaaggtgtcagc
gatatcgaaagctatacaccagaacatgtagcggaaaaatatgatgggttgacgccaaaa
cagattattgacatgaagggactagccggagatgcctctgacaatatccccggtgtgact
aaaatcggtgaaaaaacagctatcaagctattgaaacaatatggctcagtcgaaggaatt
tatgaacatatcgatgaaatgaagcaaagcaaaatgaaagaaaatctgataaatgacaaa
gagcaggctttcttatcgaaaaaattggcgaccatcaatacttcagcgcctgtggatgtc
tctatcgactcattgaagtatgaagggaaaaatctcgataaactcgttccgttttataaa
gaaatggatttcaatcagttcctttctaaattgaatatcgtagaagaagaagtaaaaatg
gatgatattttgtttgaagtcgttcatgaattcaaagaggaaatgtttactacggatatg
gcgttgtacgtggaaatgatgggcgacaattatcatacagaggaaatcgtcggagtagcg
tgggggacagaaaagaaaatttatgtcacgaacgatctatctgtattcgaaaaccgagcg
ttccattcttggatcactgatccgactcggctgaaaaaagtatatgatgcgaaacgaact
tatgttgctttaaaccgctatactggaaaaacgaaaggaatcgattttgatgtcttgcta
ggtgcataccttctcgatacgaatgaaaaaagcacagatatcgaaggaatagctgctcat
tacggatacaacgatatccaatcagatgaagctgtatacggcaaaggggcgaaaaaaggt
ttaccagaagaagaggaactcttttttgctcatttagcgcgaaaagtagctgcaatcaat
gcgttgacaccaaaattgagccaagaactggcagaaaaaaaccaagaagatcttttccgg
aaaatggaactgccattgtctatcattttggcagagatggaaataagcgggatcaaagta
gatgcgactcgcttacaagaaatgaagggcgagttctctgctcgcttaagagagatcgaa
caaaaaatctacgaagaagccggcgaagaattcaatttgaattcaccaaagcaattagga
gtgatcttatttgaaaaaatgggattacccgttatcaaaaaaacaaaaactggatattcc
acagccgtagatgtactggaacagcttcgtgaacaagcaccaatcgtagaggatatcctc
acctatcgtcaaattgcaaaaattcaatctacctatgtcgagggactgctgaaagtgatc
caatcagatggaaaagtgcatacccgttatgtccagacattgacccaaacaggacgatta
agctctgttgatcctaatttgcagaacatcccgattcgattagatgaagggagaaagata
cgtcaggcatttgttcctagagaaaaagactggctgatttattcttctgactattcacaa
atcgagttacgcgtacttgcgcatatctcaaatgatgaacatttgaaagctgccttccta
gaaggtcaagatatccatgccagcacagcgatgcgtgtatttggaatcgaaaaggcagag
gatgtcacaccaaatatgcgtaggcaggcaaaagcagtgaattttggtatcgtgtatggc
atctctgattacggactttcacaaaatctaggaatcagccgaaaagcagcacagcaatac
atcgatacgtactttgaaaaatacccaggtgtcaaagaatatatggaaagaatcgtacgc
gaagcaaaagaccaaggctacgtcgaaacgctgtatcaccgccgtcgatatctgccagac
atcaattcaagaaattacaatatccgttcttttgcggaacgaacagctatcaatacacca
atccaaggaagtgctgctgatattttgaaaatcgcgatgatcgaattggataaacgatta
aaagaaacaggtcttcaagctacgatgctgttacaagttcatgatgaacttgtcttcgag
gtaccggaaaaagaacttgaatcattagataaattggtgaaggaagttatggaacaagct
gtttctcttcatgtaccactgatcactgacagcagttggggaaaaacgtggtacgaagca
aaataa
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