Enterococcus faecium DO: HMPREF0351_11645
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Entry
HMPREF0351_11645 CDS
T02120
Symbol
uvrB
Name
(GenBank) excision endonuclease subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
efu
Enterococcus faecium DO
Pathway
efu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0351_11645 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_11645 (uvrB)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0351_11645 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0351_11645 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_25
AAA_7
AAA_19
AAA_5
AAA_22
TrwB_AAD_bind
Microtub_bd
AAA_16
DUF87
SHCBP_N
Motif
Other DBs
NCBI-ProteinID:
AFK59269
UniProt:
Q3XX90
LinkDB
All DBs
Position
complement(1623158..1625152)
Genome browser
AA seq
664 aa
AA seq
DB search
MIERDTSRHFELVSKYQPAGDQPEAINQLVDGVVGGKKAQILLGATGTGKTYTISNLIEK
VNKPTLIIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSSLLERNDVIVIASVSCIFGLGSPFEYQKQVVSIRQGAELDRNQLIRD
LVSIQFERNDIDFQRGRFRVRGDVVEIFPASRDERALRVEFFGDEVERIREVNALTGEVL
GETEHVAIFPATHFVTNDEHMEHAVANIKAELEQRLTVLRNENKLLEAQRLEQRTNYDIE
MMLEMGYTSGIENYSRHMDGRKEGEPPYTLLDFFPEDFLIVADESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEKHVNQIIYVSATPGPYEHEQTDTVIQQIIRPT
GLLDPVIEVRPIMGQIDDLVGEINERVEKDQRVFVTTLTKKMAEDLTDYFKELGIKVKYL
HSDIKTLERTEIIRDLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLV
QTIGRAARNEEGKVIMYADKVTDSMRLAMDETSRRRTIQQKYNEEHGIVPKTIIKEIRDL
ISITKESEDDTKEAVQVSYEEMTKEEKDTLLMKLEKEMKDAAKALDFETAANVRDMILEL
KASK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgattgagagagatacctcccgacactttgagcttgtctcgaaataccaaccggctggt
gatcagcctgaagcgattaaccaattagtggatggcgtagtcggcgggaaaaaagcacaa
atcttattaggtgcgactggaacagggaaaacatatacgatttccaatcttattgagaaa
gtgaataaaccaacactgattattgcccataacaaaacattggctggtcagctgtacggg
gaattcaaggaatttttccctaacaatgctgttgaatattttgtttcttattatgattat
tatcagcctgaagcttatgtgccttcaagcgatacgtatatcgaaaaagattcaagtgta
aatgatgagatcgacaaattacgacattcggctactagttcattattagaaagaaatgat
gtgatcgtcattgcatccgtttcatgtatttttggattaggctcgccttttgagtaccaa
aaacaagtagtttcgattcgacagggagcagaactagatcgcaatcagttgattcgtgac
ttagtcagtatccaattcgaaagaaatgatatagattttcagcgcggtcgttttcgagtg
cgcggtgatgtcgtggagatttttccggcttcaagagatgaacgtgccttacgtgtggag
ttttttggagatgaggtcgaacgtatccgagaagtcaatgcactgacaggtgaagtttta
ggagaaacggaacacgtagcaatcttcccggcgactcactttgtgacgaatgatgaacat
atggagcatgccgtagcgaatatcaaagcggaattagaacagcgtttaactgtcttgcga
aatgaaaacaaacttctggaagctcaacgtttagaacagcgaaccaattacgatattgaa
atgatgttagaaatgggctacacgtcgggaattgaaaattattctcggcatatggacgga
cgtaaagaaggtgaaccgccttatacgctattggatttctttcctgaagattttttgatc
gtggcggacgaatcgcacgtaaccatgcctcaaatcagaggaatgtataatggtgaccga
gcgagaaaacagatgctagtagattacggtttccgtttgccatctgctttagacaatcgg
ccacttcggttagaagagtttgaaaaacatgtcaatcagatcatttatgtctctgcgacg
ccaggaccatatgaacatgaacaaacagataccgttatccaacaaatcatccgtccgaca
gggctgcttgacccagtgatcgaagttcgtccaatcatgggacaaatcgatgatctagta
ggcgaaataaatgaacgagtcgaaaaagaccagcgggtgtttgtaacgacattgacgaaa
aaaatggcagaagacctcacagattatttcaaagaattagggatcaaagtcaaatatttg
catagtgatatcaaaacgctggaacgaacagaaatcattcgagatcttcgattaggtgaa
tttgatgtgttagttggaatcaatttgcttcgtgaaggattagacgtacctgaagtttcc
cttgttgctatcttggatgcggataaagaaggctttttacgtagtgaacgttccttagtc
caaacgattggacgagctgctcggaatgaagaaggtaaagtaatcatgtacgcagacaaa
gtaacagattctatgcgtctagcgatggatgaaacgtcaagacgtcgtacgattcagcag
aagtacaatgaagaacatgggatcgttccaaaaacgatcattaaagaaatccgagatttg
atttctattacgaaagaatcggaagatgatacaaaagaagcggtacaagtctcgtacgaa
gaaatgacgaaggaagaaaaagacacgttattgatgaaattagaaaaagaaatgaaagat
gcggcaaaagctttggattttgaaacagccgcgaatgtgcgagatatgattttagaatta
aaagcttcaaagtag
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integrated database retrieval system
