Enterococcus faecium DO: HMPREF0351_12180
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Entry
HMPREF0351_12180 CDS
T02120
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
efu
Enterococcus faecium DO
Pathway
efu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0351_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efu03019
]
HMPREF0351_12180
Messenger RNA biogenesis [BR:
efu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0351_12180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AFK59804
UniProt:
Q3Y015
LinkDB
All DBs
Position
2121289..2122968
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AA seq
559 aa
AA seq
DB search
MKLSIKNNETGVFAIGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYSY
IIQNLHKVKALVITHGHEDHIGGIPYLLKQANIPIYAGPLALALITNKLDEHGLLRDAEL
HEINEDTIIRFRKTSVSFFRTTHSIPDALGIVVKTPSGNIVATGDFKFDFTPVGEPANLH
KMARIGEEGVLCLLSDSTNAEIPTFTKSEKTIGHSILKIFSKIEGRIIFASFASNIFRLQ
QAADAAVATGRKIAVFGRSMENAIVNGQRLGYIKVPDGTFVDAHEINRLPANETMILCTG
SQGEAMAALSRIANGTHRQIQIQPDDTVIFSSSPIPGNTTSVNHLINLLSEAGAEVIHGK
INNIHTSGHGGQEEQKLMLRLMKPKYFIPVHGEFRMLKVHASLAQDVGVPAENCFIMENG
DVLALTSDSARPAGHFVAGDVYIDGSGIGDIGNVVLRDRHLLSEEGLVLAVATVDIKKKE
ILAGPDILSRGFVYMRESGEMINEAQRILFHALRECLNGPDCSEYKLKEAMTGALQPFLF
ERTERHPMILPMVMTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttccatcaaaaataacgagacaggcgtctttgctattggtggattaggtgaa
atcgggaaaaatacgtatggggtacaattccaagatgaaatcattttgattgatgccggg
atcaaattcccggaagacgatttacttggaattgactatgtcattcccgactacagctac
atcatacaaaacttacacaaagtaaaagccttggtgattactcacgggcacgaagaccac
atcggcggaataccctacttgctgaaacaagcaaatattcctatctatgctggtcctctc
gcattagcgttgatcacaaacaaattagatgagcatggcttgcttcgagatgcagagctc
catgagatcaatgaagatacgatcatccgttttagaaagacttctgtcagctttttcaga
acgacccatagtatcccagatgcattagggatcgtggtgaaaacaccttctggaaatatc
gtagcgactggagacttcaaattcgatttcactcctgttggcgaaccagcaaacttgcat
aaaatggctcgtatcggggaagaaggagtcttgtgccttttatctgatagtacaaatgct
gagattccaacatttactaaatcagaaaaaacgattgggcattctattttgaagatcttt
tcaaaaatcgaaggacgtatcatttttgccagctttgcttctaacatcttccgtttgcag
caagcagcagatgccgctgtggcaactggtcgtaaaatcgctgttttcggacgaagcatg
gaaaatgccatcgtcaacggtcaacgtttaggatatatcaaagttccagacggcacattt
gtagatgcacacgaaatcaatcgcttgcctgccaatgaaacgatgatcctatgtacaggt
tctcaaggagaagcgatggccgcgttgagccgcatcgcgaatggtactcaccgtcaaatc
caaatccagccagacgatacagtgatcttttcaagttcacctattcctggtaatacaaca
agtgtcaatcatttgatcaatttgctgtctgaagctggtgcagaagtgattcacggaaaa
atcaataacatccatacttccggtcacggtggacaagaagaacaaaaattaatgcttcgt
ttgatgaagccaaaatattttattcctgtccacggagaattccgcatgttgaaagtacat
gcttctctagcacaagatgtaggtgttcctgcagaaaactgcttcatcatggaaaatggc
gatgttttagcgttaactagcgattctgcgcgtcctgctgggcattttgtggctggagat
gtgtatatcgatggtagcgggatcggtgatattggtaatgtcgttttacgtgaccgtcac
ctgctttcagaagaaggtcttgtattagctgtcgcgacagtggatatcaagaaaaaagaa
atcttggctggtccagatattctctctcgtggatttgtctacatgcgagaatcaggagaa
atgatcaatgaagctcagcgaatcttattccacgctttaagagaatgtttgaatggacct
gactgttcagaatataaattgaaagaagcgatgactggcgcgcttcagcctttcttattc
gaacgtacagaaagacatccaatgattttgccaatggtaatgacaccagatgaagaataa
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