Enterococcus faecium DO: HMPREF0351_12428
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Entry
HMPREF0351_12428 CDS
T02120
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
efu
Enterococcus faecium DO
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_12428 (sbcD)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0351_12428 (sbcD)
Archaeal homologous recombinant proteins
HMPREF0351_12428 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFK60052
UniProt:
Q3XYC1
LinkDB
All DBs
Position
complement(2373752..2374873)
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AA seq
373 aa
AA seq
DB search
MRFLHTADWHIGKKLQGYDLIEDQRHVLSSILDIAKEEKVEAIVIAGDLYDRSVPAVDAV
ELYNELMVDWNLKEKIPIFAISGNHDSSTRLSAGTPWFSYSNYFLRTQLAEAFEPVEFKN
VQFFFLPYFEPIAARLYFEDDNIRTIKQAVAKVIDKMQELFDSEKKQVLISHFFVMGSVK
SDSETKIEVGGLDSIPGELLTPFDYVALGHLHNQAALRQDNARYSGSPLKFSLSEINQKK
GVWIVDLTTGLELNFREIEPLHDIEEITASFKELLDPAFYQSVNRENYIYIYLTDRTIIP
NMMNQLRQIYPRILGIERANGRAEQTKRKRKVLEMKDPQKLAEAFFSEMTEEQLTANQEK
WLGETLQEIMEME
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttacatacagccgattggcatatcggaaaaaaactacaaggttatgacttg
attgaagaccagcgtcatgtactatcttctatactagatatcgcgaaagaagaaaaagta
gaggcaatcgtgattgccggagacttatatgataggagtgtcccagctgttgatgccgta
gaattatacaatgaattgatggtcgattggaatttaaaggaaaagatcccgatttttgct
atatcaggaaatcacgatagcagtacgagactttcagcgggtacgccatggttcagttat
tcgaactattttttgcgaacacagctagcagaagcatttgaaccagtcgagtttaaaaac
gtacaatttttctttcttccttactttgaaccaattgcagcgagattatattttgaagat
gacaatatccgaacgatcaagcaagcggtagccaaggtgatagataaaatgcaggagcta
tttgattcagaaaaaaaacaagtattgattagccatttttttgtaatgggaagtgtaaaa
tctgattcggaaacgaaaatcgaagtaggcgggttggattcgatccctggtgaactactt
acaccgtttgattatgtagcactaggacatttgcataatcaagctgctttgagacaggat
aatgctcgctatagcggttccccattgaaattctctttatctgagatcaaccaaaaaaaa
ggcgtatggatcgttgacctgacaacaggcctggagttgaattttagggagatcgaaccc
ctgcatgatattgaagaaataacagcgagtttcaaagaattgctggatcctgccttttat
cagtccgtcaatcgggagaattacatctatatctatctcactgatagaacgatcatcccg
aatatgatgaaccagcttcggcaaatatatcctcgtattttggggattgaacgggcaaac
ggtcgagcagaacaaacaaagcgcaaacgaaaagtactagaaatgaaagatcctcaaaaa
ttagcagaagcattttttagtgaaatgacggaagagcagctaactgcaaaccaagaaaaa
tggctcggagaaacgttgcaagaaatcatggaaatggaatga
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