Enterococcus faecium DO: HMPREF0351_12606
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Entry
HMPREF0351_12606 CDS
T02120
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
efu
Enterococcus faecium DO
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_12606 (radA)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0351_12606 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
ABC_tran
AAA_16
AAA_22
Rad51
AAA_30
AAA
Lon_C
AAA_14
nSTAND3
AAA_24
SLFN-g3_helicase
KdpD
NTPase_1
AAA_19
ATPase_2
AAA_5
RecA
NACHT
RUBY_RBDX
GvpD_P-loop
MCM
HypA
DUF7125
T2SSE
CbiA
NPHP3_N
divDNAB
DUF7129
AAA_10
Rad17
AAA_31
DZR
Motif
Other DBs
NCBI-ProteinID:
AFK60230
UniProt:
I3U5E2
LinkDB
All DBs
Position
complement(2588614..2590011)
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AA seq
465 aa
AA seq
DB search
MIRIKGGGTMAKKSKVQFVCQNCGYVSPKFLGRCPNCGKWNTMVEEIEQDTTDRRTRTSL
TGEKAKPTKIADVVPKKEPRIKTKLEELNRVLGGGVVPGSMVLIGGDPGIGKSTLLLQVS
QQLAAIGGKVLYVSGEESAEQIKLRAERLGSINTEFYLYAETDMNEISRAIEHISPDYVI
IDSIQTMTQPDITSVAGSVSQVRETTAELLKIAKTNGIAIFIVGHVTKEGSIAGPRMLEH
MVDTVLYFEGEQHHSFRILRAVKNRFGSTNEIGIFEMHEHGLEEVANPSQIFLEERLDGA
TGSAIVVAMEGTRPILVEIQALVTPTMFGNAKRTTTGLDFNRVSLIMAVLEKRAGLLLQN
QDAYLKAAGGVKLNEPAIDLAIAVSIASSYKEKGTQPTECFIGEIGLTGEIRRVSHIEQR
VKEVQKLGFTKVYLPKNNLGNWEAPKGIEIVGVATLAETLKRVFR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgattaggataaaaggaggcggtacaatggcaaaaaaatcaaaagtacaatttgtttgc
caaaattgcgggtatgtgtcgcctaagttcttgggacgctgcccaaattgcggaaaatgg
aatacgatggtcgaagaaatcgaacaagatacaacggaccgcagaactcggacaagtttg
acaggagaaaaagcaaaaccaacaaaaatcgcagacgtcgtccctaaaaaagaacctcgg
atcaaaacaaaattagaagaactgaaccgtgtgttaggcggaggtgtggtgccagggtct
atggtcttgattggtggcgatccaggtatcgggaaatccactttgctgttacaagtttct
cagcaattagcagccataggcggaaaagtcttatatgtatccggcgaagaaagcgcagag
cagataaaattacgcgcggaacgcctcggaagtatcaacacagaattttatctatacgct
gaaacagatatgaacgaaatcagtcgtgccatcgaacatatctcccctgattatgttatc
attgattccatccaaacgatgacgcagccagacatcacaagtgtggcaggaagtgtcagc
caagtaagagaaaccactgcagaactactcaaaatcgctaaaacaaatgggatagccatt
tttatcgtcggtcatgttaccaaagaaggctcgatcgccggcccaagaatgttagaacat
atggtggatacggtgttatattttgaaggtgaacaacatcatagttttcggattttgcga
gcagtaaaaaaccgatttggctcaacgaatgagattgggatttttgaaatgcatgagcat
ggattggaagaagtcgctaatccttcacagattttcttagaagaacgcctagacggtgca
actggctctgctatcgttgtggcaatggaagggacacgtccaattttggtagagatccaa
gcattagtcacacctactatgttcggaaatgccaaacgaacaacaacaggtcttgatttc
aatcgggtatctctgatcatggcagtgctggaaaaaagagctgggttgcttcttcagaat
caagatgcttacttaaaagctgcaggtggggtaaaattaaatgaaccagcgattgattta
gctatcgctgtcagtattgcttcaagctataaagaaaaaggaacacagccaacggaatgt
ttcatcggtgaaattggactgactggagaaatcagacgtgtcagtcatattgaacaacga
gtcaaagaagtccaaaaactcggcttcacaaaagtatacctacctaaaaacaacttaggt
aactgggaagcgccaaaaggaatcgagatagttggagtagcaactttggctgaaacgttg
aagcgtgtgttccgctaa
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