Eptesicus fuscus (big brown bat): 103283406
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Entry
103283406 CDS
T09083
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X7
KO
K12821
pre-mRNA-processing factor 40
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103283406 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efus03041
]
103283406 (PRPF40A)
Spliceosome [BR:
efus03041
]
Complex A
U1 snRNP components
U1 related factors
103283406 (PRPF40A)
Complex B
103283406 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103283406
NCBI-ProteinID:
XP_008136907
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All DBs
Position
11:complement(33210178..33258646)
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AA seq
990 aa
AA seq
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MQATPSEPEAGGESPQSCVSEAHSGWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGICSGSGRRRSSLSPMMRPGTGAERGGLMMGHPGMHYASMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDITAGTTGTKS
MWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQT
KESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESNKQEECTTASTAPVPTTEI
PSTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSANTVGGTVPVVPEPEVTSIVATV
VDNENTVTISTEEQAQLTTTPAVQDQNVDSNAGEETSKETVADFTPKKEEDESQPAKKTY
TWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQT
EKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIY
EDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEE
LQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLH
SMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGF
VVEVNTTFEDFVAVISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKES
AFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHH
SKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKK
SKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSS
GNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgagcctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gaagcgcactctggttggacagcgggaaagcctgtcagcctactggccccgctgatcccg
ccccgtagtgccgggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagcccgatgatg
aggccggggacgggagccgagcgtggaggcctcatgatggggcatcctggcatgcattat
gcctcaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgtaccacatgga
atgatgccacagatgatgcccccaatgggaggtccaccaatgggtcaaatgcctggaatg
atgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcct
gccttaccgccaggagtaaataatatggatataacagcaggtacaacaggcacaaaatca
atgtggactgaacataaatcacctgatggaaggacttactactacaatactgagacaaaa
cagtctacttgggagaaaccagatgatcttaaaacacctgctgagcaacttttatctaaa
tgcccctggaaggagtacaagtctgactctgggaagccatactattataattctcaaaca
aaagaatcccgttgggccaaacccaaagaacttgaggatcttgaaggataccagaatacc
attgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaa
agcaataagcaagaagaatgcaccacagcatcaacagccccagttcctacaacagaaatt
ccttccacaatgagcaccatggctgctgcagaagcggcagctgctgttgttgcagctgcc
gcagctgctgctgcagctgctgccgcagccaacgccaatgcctccacctctgctaatact
gtcggtggaactgttcctgttgtacctgagcctgaagttacttcaattgttgctactgtt
gtagataatgaaaacacagtaacaatttcaactgaagaacaagcacaacttactactacc
cctgctgttcaggatcagaatgttgacagtaatgctggagaagaaacatctaaggaaact
gtagctgattttactcccaagaaagaagaggacgaaagccaaccagcaaagaaaacatat
acttggaatacaaaggaggaggcaaagcaagcatttaaagagttattgaaagaaaagcgg
gtaccatctaatgcttcatgggagcaagctatgaaaatgattattaatgatccacgatac
agtgctttagcaaagttgagtgaaaaaaaacaggcctttaatgcctataaagttcagaca
gagaaagaagaaaaagaagaagcaaggtcgaaatacaaagaggctaaggaatcctttcag
cgttttcttgaaaatcatgagaaaatgacctccacaaccagatacaaaaaagcagagcaa
atgtttggcgagatggaagtctggaatgcaatatcggagcgtgatcgtcttgaaatctat
gaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttacgaaag
agaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacatattctact
acttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagatgaggaa
ttacaaaacatggataaagaagatgcgttaatttgctttgaagaacatattcgggcttta
gaaaaggaggaggaagaagaaaaacagaagagtttgctgagagaaaggcgacgacagcgt
aaaaatagagaatcttttcagatatttttagatgaattgcatgaacacggacaactgcat
tccatgtcatcttggatggaattgtatccaacaattagttctgacattagattcactaac
atgcttggtcagcctggatcaactgcacttgaccttttcaagttttatgttgaggatctt
aaagcacgttatcatgatgagaagaagataataaaagatattctaaaggataaaggattt
gtagttgaagtaaatactactttcgaagattttgtggcagtaatcagttcaactaaaaga
tcaaccacattagatgccggaaatattaagttggcttttaatagtttactagaaaaggca
gaagcccgtgaacgtgaaagagaaaaagaggaggctcgcaagatgaaacggaaagaatct
gcatttaagagtatgttgaaacaagctgctcccccaatagaattggatgctgtctgggaa
gatatccgggagagatttgtaaaagagccagcatttgaggacataactctagagtctgaa
agaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcaacatcatcat
tcaaagaacaaaaaacattctaaaaaatctaaaaaacaccacaggaaacgttcccgctct
cgatcggggtcagattcagatgacgacgacagccatacaaagaaaaaaagacagagatcg
gaatctcgttctgcttcagaacattcttctagtgcagagtctgagagaagttacaagaag
tctaaaaaacataagaagaaaagcaagaagaggagacataaatctgactctccggagtca
gatgctgagcgagagaaggataagaaagaaaaagaccgggaaagtgaaaaagacagaact
agacaaagatcagaatcaaaacacaaatcacctaagaaaaagactggaaaggattcttct
ggtaattgggatacttctggcagtgaactgagtgaaggagaattggaaaagcgcaggagg
acccttttggagcaactggatgatgatcaataa
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