Eptesicus fuscus (big brown bat): 103284323
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Entry
103284323 CDS
T09083
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103284323 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efus03021
]
103284323 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
efus03019
]
103284323 (SUPT5H)
Transcription machinery [BR:
efus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103284323 (SUPT5H)
RNA polymerase I system
103284323 (SUPT5H)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103284323 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
103284323
NCBI-ProteinID:
XP_027998505
LinkDB
All DBs
Position
21:36813694..36844924
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVGEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWIAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTLG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMNSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVMGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVHMDLDEQFKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaatttctctgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtaggggaggagcggcggagcgcagcaggcagtgagaaggaggaa
gagcccgaggaagaggaggaggaggaggaggaggaagaatatgatgaggaagaagaggaa
gaagatgatgaccgacctcccaagaaaccccgccatggtggcttcattctggatgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaagatggagcagaggacatccta
gagaaagaagagattgaagcctccaatatcgataatgttgtcctggacgaagaccgttct
ggggctcgccgcctacagaacctctggagggaccagcgagaagaagagttaggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggagggtctgatgag
ctctctgatgacatcactcagcagcagctgctcccaggagtcaaggatccaaatctgtgg
actgtcaaatgtaagattggagaggaacgggccacagccatttccttgatgcgcaagttc
attgcttaccagttcacagacacgcccctgcagattaaatcggtagtggcaccagagcac
gtgaagggctacatctacgtggaggcctataagcagacccacgtgaagcaggccatcgag
ggcgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtggtgaaggaggtggccaacctgaaacccaaatcctgggtccgc
ctcaagcgaggcatctataaggatgacatcgcacaggtggattatgtggagcccagccaa
aacaccatctctctgaagatgatcccacgcatcgactatgaccgcatcaaggcccgcatg
agtttgaaagactggattgctaaaaggaagaagtttaaacggcctccacagaggctgttt
gacgctgagaagattaggtccctggggggcgatgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagccggaagggctttctgtttaagagcttcgccatgtctgct
gtgatcacagagggtgtgaagcccacactctctgagctggagaagtttgaggaccagccg
gagggcattgacctggaggtggtgactgagagcacagggaaggaaagggagcacaacttc
caacctggggacaatgtggaggtgtgtgagggtgagctcatcaacctgcagggcaagatt
ctcagtgtggacggtaacaagatcaccatcatgcccaagcatgaggacctcaaggacatg
ctagagttcccggcccaggaacttaggaaatacttcaagatgggggatcatgtgaaggtg
attgctggccgattcgagggtgacacaggcctcattgtgcgagtggaggagaactttgtc
atcctcttctccgacctcaccatgcatgagctgaaagtgctcccccgggacctgcagctc
tgctcagagacggcatcaggtgtggatgttgggggccagcacgaatggggggagctggtg
cagctggaccctcagaccgtgggtgtcatcgtgcgactagagcgggagaccttccaggtg
cttaatatgtatgggaaggtggtgactgtcaggcaccaggctgtgactcggaagaaagac
aaccgatttgctgtggccctggactcagaacaaaacaacatccatgtaaaagacatcgtc
aaggtcattgatggcccccactcaggccgggagggtgagattcgccatctcttccgcagc
tttgccttcctgcattgcaaaaaactggtggagaacgggggcatgtttgtctgcaagaca
cgtcacctggtgctggctgggggctcaaagccacgagatgtgaccaacttcaccttgggt
ggctttgccccaatgagtccccggatcagcagccccatgcaccccagtgctggaggtcag
cgtggtggctttggtagcccaggtggcagcagtggtggcatgagcaggggtcgggggcga
agagacaatgagctcatcggccagactgtgcgcatctcccaggggccctataaaggctac
attggtgtggtgaaggatgccacggagtctacggcccgagtggagctgcattctacctgc
cagaccatctctgtagaccgtcagcggctcaccacagtgggctcacggcgcccaggtggc
atgaactcaacctatgggcggacacccatgtatggctcccagacacccatgtatggttct
ggctcccgcacacccatgtatggctctcagacacctcttcaggatggcagccgcaccccg
cattacggctcgcagacacccctgcatgatggcagccgtactcctgcccagagtggggcc
tgggatcccaacaaccctaacacgccatcacgggctgaggaagaatatgagtacgccttc
gacgacgagcccactccatccccgcaggcctacgggggtacccccaatccccaaacacct
ggctacccagacccctcatctccgcaggttaacccgcagtacaacccacagacaccaggg
acgccagccatgtacaacacagaccagttttccccctatgctgccccctctccacaaggc
tcctaccagcccagccctagtccccagagctaccaccaggtggcaccaagcccagctggc
taccagaacacccactctccggccagctaccatcccacaccctcgcccatggcctatcag
gccagccccagtccgagccctgttggctacagtccgatgacacctggagcgccctcccct
ggtggctacaacccacatacaccaggctcaggcattgagcagaactctagtgattgggta
accactgacatccaggtgaaagtgcgggacacctatctggatacgcaagtggtggggcag
acgggggtcatccgcagtgtcatgggaggcatgtgttctgtgtacctgaaggacagtgag
aaggttgtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtcatcctgggcgaggatcgggaagccacaggagtcctgctgagcattgatggt
gaggatggcatcgtccacatggacctagatgaacagttcaagatcctcaacctccgcttc
ctggggaagctcctggaggcttga
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integrated database retrieval system
