Eptesicus fuscus (big brown bat): 103284595
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Entry
103284595 CDS
T09083
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103284595 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103284595 (EDC4)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103284595 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103284595 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
103284595
NCBI-ProteinID:
XP_008138146
LinkDB
All DBs
Position
21:complement(12917788..12928844)
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AA seq
1401 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPNAESQRPSNTYNGDLNGLLVPDPLCSGDGTS
ANKPGLRSKPSINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHVNSPQLACLDEAGNLFVWHLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPMVALLHEDRAEVWNLDMLRSNHSTWPVDVSQIKQGFIMVKGHSTYL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHELKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
REDFAFGESRPELGSEGLSSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSTSLQQIASSPSNSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQLD
GSLTMSSSGGSSLQASPRSLLPSLLPGPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEDLEPNSMASAASALHLLS
PRPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSS
LAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASAAGGFSTKVP
TPRLPAKDWKTKGSPRTSPKLKRKGKKDDGDSAVGSRLTEHQVAEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLNTSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKVREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPATHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKVARRLSLMLHGLVTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatagaggacgccacgcagcacctacgggacattctc
aagctggaccggcccgcgggaggccccaatgcagagagccagcggccatctaacacctac
aatggtgacctcaatgggctcttggtcccagaccccctctgctcaggggatggtacttca
gcaaacaagcctggtctccgatccaagccatccattaacctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctctacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactccagcatctcgagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgattgggagcagaaatactactatggcaacctgattgctgtg
tccaactccttcttggcctatgccattcgggctgccaacaatggctcagcgatggtgcgg
gtgatcagtgtcagcacttcggagcggaccctgctcaagggcttcaccggcagtgtggct
gacctggccttcgcacacgtcaactccccacagttggcctgcctagatgaggcaggaaac
ctgttcgtgtggcacttggctctggtcaatggcaaaattcaagaagagattttagtccat
atccggcagccagagggtacgccactgaaccacttccgtaggatcatctggtgccccttc
attcccgaggagagtgaagactgctgtgaagagggcagcccaatggtggccctgttgcat
gaggaccgggctgaggtgtggaacctggacatgctccgttccaaccacagcacctggccc
gtggatgtcagccaaatcaagcagggcttcatcatggtaaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgtcctggctacagcaagccatgatggcttt
gtcaagttctggcagatctacattgaggggcaggacgagccaagatgtctgcatgagtta
aagcctcatgacgggcggccactctcctgcctcctattttgtgacaaccacaagaaacag
gaccctgaggtccctttctggagatttctcattactggtgctgaccagaatcaggagttg
aagatgtggtgcaccgtgtcttggacctgcctgcagaccattcgtttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaagtttgcttggacctctcagcagaatac
ctgattctcagcgatgtacaacggaaggtcctttacgtgatggagctgctgcagaaccag
gaagaaggccgtgcctgcttcagttccatctctgagttcctgctcacccaccctgtactg
agtttcggtatccaggtggtgagtcgctgccggctgcggcacaccgaggtgctgcctgct
gaggaagagaatgacagccttggggctgatgggacccacggagctggtgccatggagtct
gcagccggtgtgctcatcaagctcttctgtgtgcatacgaaggcgttgcaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggccccgctccccacccacactgcc
cgtgaggattttgcatttggagaatctcggcctgaactgggctctgagggcctaagttca
gctactcacggctcccagcctgatctccgacgcattgtggagctacctgcacccgccgac
ttccttagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatgaca
cctagcacctctttacaacagattgcttcatcccctagtaacagcagcagtagcagcagc
agcagcagcagcagctcctctcttacagctgtttctgccatgagcagtacctcagctgtg
gacccctccttgcccaggccacctgaggagctgaccttgagccccaagctgcagctggat
ggcagtctgacaatgagcagcagcggcggcagcagcctgcaggcaagcccacgcagcctc
ctgcccagcctgctcccaggtccagctgacaaattgactcccaaagggcctggacaggta
cctactgctgcctctgcactctccctggagctgcaggaagtagagcccttggggctaccc
caggcttcccccagccgtacccgctctcccgatgttatctcctcggcttccactgccctg
tcccaggacatccctgagatcgcatctgaggccctgtcccgtggctttggttcctctgct
cctgaggaccttgagccaaacagtatggcctcagctgcgtctgcactacatctgctgtcc
ccacggccccgtccagggcctgagcttggcccccagcttagcctggatggaggcccggga
gatggggatcggcatagtaccccttcccttctggaggcagccttgacccaggaggccaca
gcccctgacagtcaggtctggccaacagcaccagacattactcgggagacctgcagcagt
ctcgcagaaagccccaggaatggccttcaggaaaagcataagagcttggccttccaccga
ccaccttatcacttgctgcagcaacatgacagccaggacaccagcgctgaacaaagtgac
cacgatgatgaggtggccagccttgcctctgctgcagggggctttagcaccaaagttccc
actccacggctgcctgccaaggactggaagactaagggatcccctcggacctcacccaag
ctcaagaggaagggcaaaaaggatgacggggattcagccgtgggatcccggctcacggag
caccaggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagag
ctggcggagctgcggcacagccaagaagagctgctgcagcgtctgtgcacccaactcgaa
ggcctgcagagcaccgtcacaggccacgtggaacgtgccctcgagtctcggcatgaacag
gagcagcggcggctggagcgggcactggccgaggggcagcaacggggtgggcagctgcag
gaacagctgacacaacagctgtcccaggcactgtcttcagctgtggctgggcgactagag
cgtagcatacgggatgagatcaagaagacggtgcctccatgtgtctctcggagtctggag
cctgtggcaggtcaactgaacacctcagtggccaccaagctcacagctgtggagggtagc
atgaaagagaatatctccaagctgctgaagtccaagaacctgacagatgccatcgcccga
gcagctgcagacacgttacaggggcccatgcaggccgcctaccgtgaagccttccagagt
gtggtgctgcctgcctttgagaagagctgccaggccatgttccagcagatcaatgatagt
ttccgactgggcacacaggaatacttgcaacagctagagagccacatgaagagccggaag
gtgcgagagcaggaggcgagggagcctgtattagctcagctgcggggcctggtcagcaca
ctgcagggcgccactgagcagatggcagccactgtgtccagcagtgttcgggctgaggtg
cagcaccagctgcatgtggctgtgggcagcctgcaggagtccattttagcacaggtacag
cgcattgttaagggtgaggtgagtgtggcactcaaggagcagcaggccgccgtcacctct
agcatcatgcaggccatgcgctcagctgctggcacacctgtccctgctacccacctcgat
tgccaagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggccctgacagctgctgacctgaacctggtgctgtacgtttgtgaaactgtg
gacccgggccaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttcc
ctcatccagcagctggcctctgaccttggcactcgaactgacctcaagctaagctacttg
gaagaggctgtgatgcatctggaccacagtgaccctatcactcgggaccacatgggctcc
gtcatggcccaagtgcgccagaagctcttccagttcctgcaggccgaaccacacaattca
ctcggcaaagtggcccggcgtctcagcctcatgttgcatggccttgtgacccccagcctc
ccttag
DBGET
integrated database retrieval system
