Eptesicus fuscus (big brown bat): 103284798
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Entry
103284798 CDS
T09083
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103284798 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103284798 (CNOT1)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103284798 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103284798 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
103284798
NCBI-ProteinID:
XP_054566166
LinkDB
All DBs
Position
21:19171317..19246062
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAGQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPALNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMDVFPVDLIYRPWKNAEGQLSFIQHSLINPEIFC
FADYPCHTVVIDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVMALLQINSSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPTKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcttca
ctgattacaaagccaaattttatctctacattgtcctatgccattgataacccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctaagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcagatagacgcttttcttaagacgctgcgcagagattttccccaagaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctggccaggtagcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattgcagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgatggcgcacaggcacatacatggaatgtagaagtc
ttgattgatgttctcaaagagctgaacccggctttgaattttaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggattgggtatggacgtgttcccagtagacctcatatatagaccttggaaa
aacgcagaaggccagctctcctttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgtcattgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacgtggaagagcttggatttgattgaatctctactgaggctc
gcagaggtgggacaatatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtaatggccttactacaaatcaacagctcctggcacaccttgcgccat
gaactcatctctactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctctatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggagagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagaggcggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccggaaactctggcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggaattatcagaaaccatcctcaccatggtagccaattgcagcaatgtc
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacactcagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttctactcca
aatcaaacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcacttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgt
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggccttgccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatcctcagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttcccacaaaagcacctcttgctgggcaggttagcactatggta
acgacctcaacaaccaccactgttgcaaaaacggttacagtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgtg
gccacagatcaaactgaaagaattgtagagccccccgaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
acagtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaataagatggttctaactgagacctacagaaatatcaaagtgctcttgacctctgac
aaagctgcagccaatttttcagatcgttctttgctgaagaacttgggacactggctagga
atgatcacactagctaaaaataaacccatcctacatactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtggtgccctttgttgcc
aaagttttagagtctagcattcgtagcgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacacgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaacgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcagctctctgctccaaag
aaagatgtgaagcaaccagaagaacttcctcccatcacaaccacaacaacttctacaaca
ccagctactagtaccacctgtacagccactgttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcaggcctggctccacatattactctaaatccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgtcaagcaattgaacgggct
gttcaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcaggaaggactttgccctggattctgaggaatctcggatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacctgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagcccttcgtactgcg
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtggaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagaacaaataagattaaaa
gtcggtggtgtggacccaaagcagttggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacggatgatgtagctcaaatttatgacaagtgcattacagaactagag
cagcacctacatgccatcccaccaactttggccatgaaccctcaagctcaagctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggccgtagagggcttactagatgccacaagtggtgctgatgctgacctg
ctgctgcgctacagggaatgccacctcttggtcttgaaggctcttcaagatggccgggcg
tatgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcttgctggtggatgaaaggagtgttgcccatattact
gaggctgatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttcttccgtctgtgtactgaaatgtgtgttgaaatcagttatcgtgcc
caggcagagcagcagcacaaccctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgccctgttagtgaagcactcaggggaggcc
accaacactgtcacaaagattaacctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgtccggcaaagtgaatttcagcagcttccctaccatcgcatt
tttatcatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcgtggcttgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttctgcatgatttcccggagttcctttgtgattac
cattatggattctgtgatgtgatcccacccaattgtattcagctaagaaacctgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaattaacatcgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcggtcaccagtcacttttcta
tctgatctgcgcagcaacctacaggtatccaatgagcctggcaatcgctataacctgcag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcacacatccataacaag
ggcagcacaccttcgatgagcaccatcacccactcggctcacatggacatattccagaac
ctggctgtagacttggacactgaaggtcggtatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtacctttttgca
gaggccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctacttattaccttcattgaactgattaaaaatcca
gcatttaagttctggaaccatgaatttgtacactgtgccccagaaattgaaaagttattc
cagtccgtcgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
