Eptesicus fuscus (big brown bat): 103285617
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Entry
103285617 CDS
T09083
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X2
KO
K16498
protocadherin delta 1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103285617 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efus01009
]
103285617 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efus04515
]
103285617 (PCDH1)
Protein phosphatases and associated proteins [BR:
efus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103285617 (PCDH1)
Cell adhesion molecules [BR:
efus04515
]
Cadherins
Protocadherins
103285617 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103285617
NCBI-ProteinID:
XP_008139236
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Position
6:complement(80881204..80907176)
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AA seq
1238 aa
AA seq
DB search
MDCKARGRRCPEAAFLIPEPARMGPLRPSPGPGGRGLSMPPLLLALLLLLLAPSPGHTTQ
VVYKVLEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREG
LRECQNQFPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLTIPE
NTNIGSLFSIPVASDRDAGPNGVASYELQAGPEAHDLFGLQVAEDQDGKQPQLIVMGNLD
RERQDSYDLTIKVQDGGNPPRASSALLRVTVMDTNDNAPKFERPSYEAELSENSPIGHSV
IQVKANDSDQGANAEIDYMFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLA
KDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVSEETAVALVQV
SDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTSPLDYEKVKDYTIEIVAV
DSGNPPLSSTNSLKVQVVDINDNAPVFTQSVTEVSFLENNKPGEVVAEVTASDADSGSNA
ELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRENYELKVVAADRGSPSLQGTATVL
INVLDYNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARIQLTVEQDNGDFV
IQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPS
NTSHQLLTPQTRLGETVSQVTAEDIDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKE
IERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLTNRTLLENLLGHSLDTPLDIDIA
GDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAP
KPSNKASKGNKSKGKKSKSPKPVKPVEDEDETGLQKSLKFNLMSDAPGDSPRIHLPLNYP
PGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSD
YSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRL
GPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQS
SPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSH
DSCKDSATLEEIPLTQTSDFQPAAAPASAQTAKREIYL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggactgcaaggcccgcggccggcgctgcccggaggcggccttcctgattccagagcct
gcccggatggggcccctgaggcccagcccaggccctggggggcgaggattgtcgatgccc
cccttgctgctggcactgctgctactcctgctggctccatccccaggtcacaccactcag
gtggtgtacaaggtgctggaagaacagccacccaacaccctcattgggagcctcgcagcc
gactacggtttaccagacgtgggccacctgtacaaactagaggtaggcgccccgtacctg
cgggtggatggcaagacaggcgacatcttcaccaccgagacctctatcgaccgcgagggg
ctccgcgagtgccaaaaccagttccctggtgagccctgcatcctggagttcgaggtgtcc
atcacggacctcgtgcagaatggcagtccccggctgcttgagggccagatagaggtacag
gacatcaatgacaacacacccaacttcgcctcacccgtcatcacgctgaccatccccgag
aacaccaacattggctcgctcttctccatcccagtggcttcagaccgtgatgctggcccc
aacggtgtggcatcctacgagctgcaggccgggcctgaggcccacgatctatttgggctg
caggtggcggaggaccaggatgggaaacagccacagctcattgtgatgggcaacctggac
cgggagcgccaggactcctatgacctcaccatcaaggtgcaggatggtggcaacccccca
cgtgccagcagcgccctgctgcgcgtcactgtgatggacaccaatgacaacgcccccaaa
ttcgagcggccctcctatgaggctgagctgtctgagaacagcccaataggccactcggtc
atccaggtgaaggccaatgactcagaccaaggtgccaacgcagagatagactacatgttc
caccaggcacctgaagtcgtgaggcgtcttctgcgactggacaggaacactggacttatc
actgtgcagggccccgtggaccgcgaggacctgagtaccctgcgtttctcagtgcttgcc
aaggaccgaggcaccaaccccaagagtgcccgtgcccaggtggtggtgaccgtgaaggac
atgaacgacaacgcccccaccattgagatccggggcataggcctggtgacccatcaagat
gggatggctaacatctcagaggacgtgtcagaggagacagcagtggccctggtgcaggta
tctgaccgagatgagggagagaatgcagctgtcacctgtgtggtagcaggggacgtgccc
ttccagctacgccaggccagtgagacgggaagcgacagcaagaagaagtacttcctgcag
accaccagcccactggactacgagaaggtcaaagactacaccatcgagattgtcgccgtg
gactccggcaaccccccactttctagcaccaactccctcaaggtgcaggtggtggacatc
aatgacaatgcccctgtcttcacccagagcgtcaccgaggtcagcttcctggagaacaac
aagccgggtgaagtggtggcggaggtcacggccagtgatgccgactcgggctccaatgct
gagctggtttactccctggagcctgagccggccgccaagggcctcttcaccatttcacct
gagactggggagatccgggtaaagacatcccttgatcgggaacagcgggaaaactacgaa
ttgaaggtggtggcagctgaccggggtagccccagcctgcagggcacagccactgtcctc
atcaatgtgctggactacaatgacaatgaccccaagtttatgctaagtggctacaacttc
tccgtgatggagaacatgccagcactgagtccggtgggcatggtgactgtcattgatggg
gacaaaggggagaatgcccgaatacagctcacagtggagcaggacaatggtgactttgtg
atccagaatggcacaggcaccatcctctccagcctgagcttcgatcgggagcagcaaagc
acctacaccttccagctgaaggcggtggacggtggcgtcccacctcgctcagcttacgtt
ggcgtcacgatcaacgtgctggatgagaatgacaatgcaccctttatcaccgccccttcc
aacacctcccaccagctgctgaccccccagacacgtcttggtgagacggtcagccaggtg
acagctgaggacattgactctggtgtcaatgctgagctgatctatagcattgctggtggc
aacccttacggactcttccagattgggtcacattcaggtgccatcaccctggagaaggag
attgagcggcgccaccacgggctgcaccgtctagtggtgaaggtcagcgaccggggcaag
cccccgcgctatggcacagccttggtccacctttacgtcaatgagaccctgaccaaccgc
acgctgctggagaacctgctgggccacagcctggatacgccactggacatcgacattgct
ggggatccagaatatgagcgctccaagcagcgtggcaacatcctcttcggtgtggtggct
ggtgtggtggccgtggccttgctcatcgccctggcagtgctcgtgcgctactgccggcag
cgcgaggccaagagtggctaccaggccggtaagaaggagaccaaggacctgtacgccccc
aagcccagcaacaaagcctccaagggaaacaaaagcaagggcaagaagagcaagtccccg
aagcccgtgaagccagtggaggacgaggatgagaccgggctgcagaagtccctcaagttc
aacctgatgagcgatgcccccggggacagcccccgcatccacttgcccctcaactacccg
ccgggcagccctgacttgggccgccactaccgctctaactccccactgccttccatccag
ctgcagccacagtcgccctcagcctccaagaagcaccaggtggtgcaggacctgccgcct
gcaaacacattcgtgggcactggggacaccacgtccacgggctctgagcagtactccgac
tacagctaccgcaccaatccccccaaataccccagcaagcagttacctcaccgccgcgtc
accttctccgccaccagccaggcccaggagctacaggacccgtcccagcacagttactac
gatagtggcctggaggagtccgagacgccatccagcaagtcatcctcagggccccgactc
ggtcccctggctctgcctgaggatcactatgagcgcaccacccccgatggcagcatagga
gagatggagcaccctgagaacgacctgcgccctttgcctgatgtcgcaatgacgggcaca
tgtacccgggagtgcagcgagtttggtcactctgacacatgctggatgcccggccagtcg
tctcccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccag
gaccgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaac
accaaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccat
gattcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttc
caaccggcagccgcaccggcatctgcccagacggccaagcgcgagatctacctgtga
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