Eptesicus fuscus (big brown bat): 103286160
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Entry
103286160 CDS
T09083
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103286160 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efus04121
]
103286160 (SLX4)
03400 DNA repair and recombination proteins [BR:
efus03400
]
103286160 (SLX4)
Ubiquitin system [BR:
efus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
103286160 (SLX4)
DNA repair and recombination proteins [BR:
efus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103286160 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
103286160
NCBI-ProteinID:
XP_054570642
LinkDB
All DBs
Position
4:complement(13175607..13198375)
Genome browser
AA seq
1750 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGTKEVSGQRKTKKSSNITQLTSKPTATKSKTLQGPRE
RKTRSGSQATRTKKQGVPKWQESEPAPSENGEGSVLASAMLWRSAWSTRTEAAPNGDSQP
PPCLTATVPSPSKPRAAEMVLQRMQQFKRADPERLKHASEGCSLQPALEENIPKDPQEAI
MAGNGSGPWLPATESDTAVALALQQEFGQEGATAPDDSLEEKGLFFCQICQKNLSAMNVT
RREQHVNRCLDESEKALRPCVPQVPECPICGKPFLTSKSRISHLKQCAVKMEVDPQLLLQ
AVRLQTAQPEGTCSTLAQTSSFSNHVGGLKRKGAPNRKEPQKRQKVNEPEVLSEDLLVAM
ALSRSEMEQGVVPAMLPLGTAFPERTKLSAEKKSRKKKVPLTPPQLLVQDLETTGRQIED
RVAQLFAEEEVELSNTPPLPASRLLKEELEKASRSLQPPEGKRNFLWEGSALTRAWALES
FYTASLVPPMVPQQSTKGPTLPPVLSEQPQLGVCTPPALHSASPRNLSPSTSQREYQALQ
DLMDLAREGLSASPLPCSGGSADSKGTTGMDLLPGGLPLTGFVLPPEEQHLEMGGQASLS
LGLLVADFSAMVNNPHLSDVQFQMDNGEVLYAHKFVLYARCPLLIQYVNNEGFFAVEDGD
LRTQRVLLSDVSTEAARAFLHYLYTADTSLPPQLTPDLSSLACRFGVSELVHLCKQASVV
MDSEGRQEKEDEDCETRAENFQELLRSMWVGEEEEAEALLKSEGLEEDREKVNEAEMEEI
YEFAATQRKLLQGERAPEIKEETNQLGEDSPGSRRILANIQVKEESENTEQMEPSGQGRD
ECLTKRKNERQSMFLPLKGQCSSGEEEAEAPKEALDHTSSSRSSQGRWAEEKEGRLMYSV
DDVDDEHSFSSTPGGHPEPSQVTSDHERGNGTIKQRRGQSSHRSSRRQAPPSQPCFFPSQ
PPPGRSPRQPHLHPHRKNDLSPPTPQSQGRASRVASQDTPLKQKRGRSLLTLFNHPGCQK
GEERGSVLECRNKGTLTSPEKSPSIDLTQAKPGQQSSRSQNSPSNLNREDEIILLLDSDE
ELELEQTKIKSVFNGSLEEKVLEVSPKFSDLFSIIDVDADQEPSQSPPKREATVQQEERR
PSRNPGCVGGRGSSQLFCNRESSPDEDSTTDTSWLVPATPLCSRSHEHSSQTQILGLGSK
TSACEMAQPQPRAPLENRDGPKAASKFSAIVHQTSSSCLVPVNHRSPSSPSPRRHKHFSV
LTPCPASGGLTDFSGQFQKRSLPRPSPPSQATASEVVEVEDSEDEQEVASHQAGSSSLLD
SGPPIPTDDCCWHVEPLSPIPIDNLNLERTGPLSTSSPGSRAREAPDSGDCHSPALLSTT
PIRGSCTRQRKSPEKSPQASSPGGSRLSFLNSALWEDWDGEEWKSPEALSLAQTPSTDRA
QKSEGLEKPSANRRKNLPPKVPITPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKE
IFQYTHQTLESDSEDESQSSQVPLEAPCSQIHATKTSKASRAAGRARLQATSDPIPRRSK
GPAKTKGPRHRKQPGGSIPHMSPAKEVPLGPDGDAQLPASQESTATSVDSSDSSLSSQSS
SCEFGAAFESAGEDEEGEEGVSASQAAVQAVAAEEAVRRYIRSTPALYRKVLLYQPFELA
ELQAELKQQGIRMATRKLLDFLDAHCITFTTATARKEKFKRKRRLPVGKKKRGRTDGPVR
RSPPVPVSSL
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgactttaaggaactctgtgccagttttttccaaagggtg
aaaaagaatggcaccaaggaagtgtcagggcaaaggaagacaaaaaagtcctcaaacatc
actcagctaacaagcaaaccaactgctaccaagagcaaaacccttcaaggccccagggag
aggaaaactcgatctggtagccaggccacaaggacaaaaaagcaaggggtacccaagtgg
caggagagtgaaccagctccctctgagaatggagagggaagtgtgcttgcttctgctatg
ctctggaggagtgcatggagcacccggacagaggctgctcctaacggtgactcccagcct
cctccctgtctgactgctacggtgccaagtccctccaaaccccgggcggctgagatggtc
ctacagcgaatgcagcagttcaagagagcagaccccgagcgtttgaaacatgcttcagaa
gggtgctccctccagcctgcacttgaggaaaacattccaaaggaccctcaagaggcgata
atggcggggaacgggtctgggccctggcttcctgccacagaaagcgacactgcagtggcc
ttggccctgcagcaggagtttgggcaggaaggagccaccgcacctgatgacagtctggag
gagaaggggttgttcttctgccagatctgtcaaaagaacctctctgctatgaacgtgacc
cgaagggagcagcatgtgaaccggtgcttggatgagtctgaaaaggcactgagaccttgt
gtacctcaggtccctgaatgcccaatttgtggcaagccatttctcacctcaaagagcaga
atcagtcacttgaagcagtgtgcagtgaagatggaggttgacccccagctcctgctccag
gctgtgcggctgcaaacagctcagcctgaggggacctgcagcacactagcacagacatcg
agcttcagcaatcacgttggaggtctgaagcggaagggagcccccaacaggaaggaacca
cagaagaggcagaaggtcaatgagcctgaggtgctgtctgaggacctgctggtggccatg
gctctatcccggtccgagatggagcagggggttgtacctgcaatgctcccgctgggaact
gcttttcccgagaggacaaaactgtcagcagagaagaagagtcgaaagaagaaagtaccc
cttaccccaccgcagttgttagtccaggacttggagaccacaggaagacagattgaggat
cgagtggcccagctctttgcagaggaagaagtggaattgtccaacacgccaccacttcct
gcgagcagacttttaaaggaagagctggaaaaggctagcaggagtctacaaccacctgaa
gggaagcggaactttctgtgggagggcagcgccctgaccagggcctgggctctggagtcc
ttctatacggcaagcctggtgcctcccatggtgccccagcagtccaccaaggggcccacg
ctgccaccagtgttgtctgaacagccacagctgggcgtgtgcacaccacctgccctccat
agtgccagtcccaggaatctgtcaccctccaccagccaaagggagtaccaggccctgcag
gacctcatggacctggcaagagaggggttgagcgccagcccattgccctgcagcgggggt
tctgctgactcaaaggggaccacagggatggatctattgcctggtggccttccactgact
gggtttgtcctgccacctgaggagcagcacttggaaatgggcggccaggcttcgctctcg
ctcggtttgctggttgctgacttcagtgccatggtaaataacccacacctgagtgatgtc
cagtttcagatggacaacggggaagtgctgtatgcccacaagttcgtgctttatgcccga
tgcccacttctcattcagtatgtaaacaatgaaggattcttcgctgtagaagatggcgat
ctaagaactcagcgtgtcctgctgagtgatgtgagcactgaggctgcccgtgcgttcctg
cattatctctacactgcagacactagcctgcctccccagctgacccctgacctcagttct
ctggcctgcaggtttggtgtgagtgagcttgttcacctgtgtaaacaagcatctgtcgtg
atggattcagagggcagacaggagaaggaagatgaggattgtgaaaccagagcagagaat
ttccaagaactcttgaggtcaatgtgggtaggtgaagaggaggaagcagaagccttgttg
aaatctgagggccttgaagaagatagagaaaaggtcaatgaagcagaaatggaagaaatt
tatgaatttgctgctactcagagaaagctgctccagggggaaagagctccagagatcaaa
gaagaaactaaccagcttggggaggacagtccaggttctaggcgaatcctagcaaacatc
caggttaaagaagagtcagaaaatacggaacagatggaaccatctgggcagggaagagat
gagtgcctcaccaaaagaaaaaatgagagacagtccatgttcctgccactcaagggccag
tgttcaagtggagaggaggaagcagaggccccaaaggaagccctggatcacaccagctcc
tctcgctcctctcagggccgctgggcagaggaaaaggaaggacgcttaatgtactcagtt
gatgatgttgatgatgaacattccttttcatcaactccaggagggcaccctgaaccgtcc
caagtaacaagtgatcacgagagaggcaatggcactatcaaacaaaggcggggacagagc
tctcatcgctctagtcgccggcaggcacctccatcacagccatgcttcttcccatcacag
ccccctccgggcaggagtccacgccaaccacaccttcaccctcatcgcaaaaatgactta
tccccaccgacgccccaatctcagggcagagcttccagagtggcctcccaggacacacca
ttgaagcagaagaggggacggagccttctcacgctatttaaccatccaggctgccagaaa
ggcgaagaacgtggttctgtgttggaatgcagaaataaagggaccctgacctcaccagaa
aagtctccatccatcgacctaactcaggcaaaacctggccaacagagctccagatctcag
aattctccctccaacctgaacagagaagatgagattatccttttattggattcagatgaa
gagctagagctagaacaaaccaaaataaagtcagtttttaatggttccctggaagaaaaa
gttttagaagttagccccaagttctctgacctgttctccatcattgacgttgatgcagat
caggaaccttcccaaagcccaccaaagagagaggccacagtgcagcaggaggagaggcgg
ccgtcaaggaacccaggctgtgtgggtggcagagggtcctcccagctgttctgtaaccga
gagagcagcccggacgaggacagcaccacagacacctcgtggctggtacctgccaccccg
ctctgcagcagaagtcacgaacactcatcacagacccaaatcctgggtcttgggtccaag
acttcagcatgtgaaatggctcagccccagcccagggccccattagaaaacagggatgga
cccaaagccgctagtaagttttcagcaattgtgcaccagacatcgtcatcctgcctggtc
cctgtcaatcacagaagcccttccagtcccagccccaggcgccacaagcacttttctgtg
ctgactccctgtccagcctccggaggcctcaccgatttcagtgggcagttccagaagcgc
tcgctgccgaggccgagcccgccgagtcaggccacagcgagcgaagtggtggaggtggag
gacagtgaagatgagcaggaggtagcctcccatcaggcgggcagcagctccctgttggac
agcggtccccccattcccactgacgactgctgttggcatgtcgagcccctctcaccaatt
ccaattgataatttgaaccttgagcggactggccccctgagcaccagtagcccaggcagc
cgggccagggaggccccagacagcggtgactgccactccccagcactcctgagtaccacc
cccatccgaggaagctgcactcgccaaaggaagtctccagagaaatcccctcaggccagc
tcccctgggggcagcaggctgagcttcttgaattcagctctgtgggaggactgggatgga
gaagaatggaagtctccagaggccctttctctggcccagacaccaagtactgatcgagct
cagaaatcagaagggttagaaaagccaagtgctaatcggaggaagaacttgcccccaaaa
gtgcccataacgccaatgccacggtattccatcatggagaccccagtactaaagaaggaa
ctggacaggtttggggtacgccctctgcccaaacgccagatggtcctaaaactgaaggaa
atattccagtacacccaccaaacgctggagtcagactccgaggacgagagccagtcctca
caggtacccctggaggctccttgcagccaaatccatgccaccaagacctccaaagcctca
agggcagctggtcgtgccaggctgcaggccacgtctgaccctattccccgaaggtccaag
ggaccagctaagaccaagggtccccgacatcggaagcagcctggtggaagtatcccccat
atgtcaccagccaaagaggtgcctctaggccctgatggtgacgcccagctcccggcctcc
caggaatccacggccacctctgtggacagcagtgacagctcattaagctcacagagttct
tcctgtgagtttggagcggcctttgagtctgcaggagaagatgaggagggtgaggagggg
gtcagtgcttcacaggcggctgtccaggcagtggccgcggaagaggcagtgaggcgctac
atccgctccacaccagcactctaccgcaaggtcctgctgtaccagccctttgagctggcg
gagctgcaggctgagctgaagcagcagggcatccgcatggccacgaggaagctgctggat
ttcctggacgcccactgtatcaccttcaccaccgctacagcccggaaggaaaagttcaag
aggaagaggcggctgcccgtgggcaagaaaaaaagaggcagaactgatggtcctgtccgc
cgctccccacctgtgcccgtcagcagcctgtga
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integrated database retrieval system
