Eptesicus fuscus (big brown bat): 103286407
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Entry
103286407 CDS
T09083
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03013
Nucleocytoplasmic transport
efus03015
mRNA surveillance pathway
efus03040
Spliceosome
efus05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103286407 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
103286407 (NCBP1)
03015 mRNA surveillance pathway
103286407 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103286407 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103286407 (NCBP1)
03041 Spliceosome [BR:
efus03041
]
103286407 (NCBP1)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103286407 (NCBP1)
Spliceosome [BR:
efus03041
]
Common components
Common spliceosomal components
Cap binding complex
103286407 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
103286407
NCBI-ProteinID:
XP_008140097
LinkDB
All DBs
Position
15:52504859..52548778
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AA seq
790 aa
AA seq
DB search
MSRRRHRDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
IPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERNTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPDSPKPKFVKEVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATSDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFMQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFIRLFVWEILHSTIRKMNKHVLKIQKELD
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcaccgggacgagaacgacgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
attcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggattgctgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatctttgaaagcaaacaat
tataatgaagctgtgtatttggttcgttttttatctgatcttgtgaattgtcacgtcatt
gcagccccatcaatggttgctatgtttgaaaattttgtaagcgtaactcaggaagaggat
gtacctcaggtgcgacgggattggtatgtgtatgcatttctgtcatctttgccctgggtt
ggaaaggaattgtatgagaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagactcatgtgcccatgttacaagtgtggactgctgag
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcattgcagcacaatttgcctccttttacaccacctcctcacactgaggattca
gtgtacccaatgccaagagtcatcttcagaatgtttgattacacggatgatcctgagggt
cctgtaatgccagggagtcattccgtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaagaaatacttgtgccgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccatatagttgaggtgatctttgcagagctgttt
caacttccagcaccccctcacattgatgtgatgtacacaacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcgcaggcaactgaaatgttatatatg
cgtttggacacgatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgatagtcccaaaccaaagtttgtaaaagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaaatatggagatgaaagtagcaattctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccagtgatgaaatcttcagcatt
ctgaaagatgtaccaaatccgaaccaggatgatgatgatgatgaaggattcagctttaac
ccattgaaaatagaggtttttatgcagactctgctacatttggcagccaaatcattcagc
cactccttcagtgctcttgctaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaagttacatgttctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtactagtagacaagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttattagattgtttgtttgggaaatc
ctgcactctacaattcgtaagatgaacaaacacgttctgaagatacagaaagagctagat
gaagctaaagaaaaactcgcaagacagcacaaacggagaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagagcaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaacctcttccttgtcatatttcagcgctttatcatgatc
ctgactgagcatttagtacgatgtgagacggacgggaccagcatattaacaccatggtac
aagaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaattagaccctcatatcctggct
gtgttccagcagttctgtgccctacagacctaa
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